RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CLCN5P51795 746 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MAPK12P53778 367 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CDH4P55283 916 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 C21orf59P57076 290 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 DMP1Q13316 513 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 AMZ1Q400G9 498 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SMUG1Q53HV7 270 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CMPK2Q5EBM0 449 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 XKR7Q5GH72 579 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TEDDM1Q5T9Z0 273 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 LCN1P1Q5VSP4 162 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 FAM173BQ6P4H8 233 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TRIM65Q6PJ69 517 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ZNF474Q6S9Z5 364 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 CD164L2Q6UWJ8 174 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TPGS1Q6ZTW0 290 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 STXBP4Q6ZWJ1 553 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 VRK2Q86Y07 508 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 FAM58AQ8N1B3 248 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 THEM5Q8N1Q8 247 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MCPH1Q8NEM0 835 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 OR2AJ1Q8NGZ0 328 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 HM13Q8TCT9 377 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 FAR1Q8WVX9 515 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TNFRSF14Q92956 283 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 VPS35Q96QK1 796 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 OR6C1Q96RD1 312 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SNX18Q96RF0 628 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 UBAC1Q9BSL1 405 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ABHD14AQ9BUJ0 271 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 FSD1LQ9BXM9 530 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 FRMD8Q9BZ67 464 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 STRADBQ9C0K7 418 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 HDHD2Q9H0R4 259 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 OR52A5Q9H2C5 316 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ZDHHC6Q9H6R6 413 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 DCLRE1BQ9H816 532 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 AKIP1Q9NQ31 210 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.93□□□□□ -1.78
USP44-208ENST00000552440 AHSPQ9NZD4 102 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 NARFQ9UHQ1 456 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 NOCTQ9UK39 431 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 CDH9Q9ULB4 789 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 PPIL1Q9Y3C6 166 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ATG4BQ9Y4P1 393 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 A3GALT2U3KPV4 340 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CHD1O14646 1710 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 A0A1B0GUH1 482 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TUBAL3A6NHL2 446 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 PRYO14603 147 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 INPPL1O15357 1258 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ATP5HO75947 161 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 OR5F1O95221 314 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CPNE6O95741 557 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 RPSAP08865 295 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 CD63P08962 238 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ACAA1P09110 424 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 MCF2P10911 925 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 AMD1P17707 334 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TPSB2P20231 275 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 NR4A1P22736 598 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CYP2C18P33260 490 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 NUDT6P53370 316 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 RGS8P57771 180 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 NXPH1P58417 271 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 DSTNP60981 165 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SNRPEP62304 92 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 BDH1Q02338 343 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 HYAL1Q12794 435 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MSLNQ13421 630 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 STIM1Q13586 685 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CUL3Q13618 768 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TPSAB1Q15661 275 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MEP1AQ16819 746 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 C2orf68Q2NKX9 166 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 BEAN1Q3B7T3 259 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CCDC14Q49A88 953 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 PPP6R3Q5H9R7 873 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 VWA5B1Q5TIE3 1220 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TMEM53Q6P2H8 277 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SLC39A4Q6P5W5 647 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TMEM220Q6QAJ8 160 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ZNF517Q6ZMY9 492 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 COPS6Q7L5N1 327 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CCDC36Q8IYA8 594 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TMEM217Q8N7C4 229 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 PAPD5Q8NDF8 572 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 OR4C5Q8NGB2 326 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 OR1J2Q8NGS2 313 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 VANGL1Q8TAA9 524 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 GIPC3Q8TF64 312 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 KIFAP3Q92845 792 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SLCO2A1Q92959 643 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 PRMT6Q96LA8 375 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 CASD1Q96PB1 797 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 C16orf70Q9BSU1 422 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 IL22Q9GZX6 179 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 ANKRA2Q9H9E1 313 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MED4Q9NPJ6 270 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms