RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 LAS2Q8IYD9 372 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 PTGR2Q8N8N7 351 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ACOT4Q8N9L9 421 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ST6GALNAC3Q8NDV1 305 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 HUS1BQ8NHY5 278 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ELP5Q8TE02 316 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 THAP3Q8WTV1 239 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-215ENST00000552374 DCAKDQ8WVC6 231 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 SIGLEC12Q96PQ1 595 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 TAAR6Q96RI8 345 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 CSF3RQ99062 836 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 MAPKAP1Q9BPZ7 522 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 TBCDQ9BTW9 1192 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 MS4A8Q9BY19 250 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ALOXE3Q9BYJ1 711 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 DEFB126Q9BYW3 111 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ROGDIQ9GZN7 287 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 NOL11Q9H8H0 719 aaKnown RBP10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ADGRE2Q9UHX3 823 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 ZNF180Q9UJW8 692 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 OSGIN2Q9Y236 505 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 RNF11Q9Y3C5 154 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 PCDHGA11Q9Y5H2 935 aa10.22□□□□□ -0.77
TMEM116-215ENST00000552374 SAGE2PA6NJ88 616 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 CYR61O00622 381 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 KLK8O60259 260 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 CTNSO60931 367 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SMIM24O75264 130 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SNRPAP09012 282 aaKnown RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 FAM153BP0C7A2 387 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 COL6A2P12110 1019 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 EDN3P14138 238 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 TNNI3P19429 210 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 CNTFP26441 200 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 EEF1DP29692 281 aaKnown RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 PPP2R1BP30154 601 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SSR2P43308 183 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 PIK3CGP48736 1102 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 NEK2P51955 445 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 RAP1GDS1P52306 607 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 PCDH1Q08174 1060 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 STX4Q12846 297 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SLAMF1Q13291 335 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 E2F2Q14209 437 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 OR1C1Q15619 314 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 FAM153CQ494X1 144 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 DEPDC1Q5TB30 811 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 KHDRBS2Q5VWX1 349 aaKnown RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 OR4C11Q6IEV9 310 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 ZNF793Q6ZN11 406 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 TRMT10CQ7L0Y3 403 aaKnown RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 NFAM1Q8NET5 270 aaPredicted RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 ADAMTS18Q8TE60 1221 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SSC4DQ8WTU2 575 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 RGMAQ96B86 450 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 PSMG3-AS1Q96PY0 264 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 CDK15Q96Q40 435 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SORBS1Q9BX66 1292 aaKnown RBP10.21□□□□□ -0.78
TMEM116-215ENST00000552374 LYRM4Q9HD34 91 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 KCMF1Q9P0J7 381 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 XPR1Q9UBH6 696 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 FBXW2Q9UKT8 454 aa10.21□□□□□ -0.78
TMEM116-215ENST00000552374 SHANK1Q9Y566 2161 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 TRBV11-1A0A0K0K1C0 115 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 E2F3O00716 465 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 RIPK2O43353 540 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 LDB3O75112 727 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 CD46P15529 392 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 HIST1H1TP22492 207 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-215ENST00000552374 CPN2P22792 545 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 PTX3P26022 381 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-215ENST00000552374 SERPINB1P30740 379 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 PIK3CBP42338 1070 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 MAGEA12P43365 314 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 CLCN2P51788 898 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 CCNG1P51959 295 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 RPS13P62277 151 aaKnown RBP10.2□□□□□ -0.78
TMEM116-215ENST00000552374 PHEXP78562 749 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 PMP22Q01453 160 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 ID2Q02363 134 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 MAPKAPK3Q16644 382 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 ZNF468Q5VIY5 522 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-215ENST00000552374 SCUBE1Q8IWY4 988 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 HORMAD2Q8N7B1 307 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 B3GNT7Q8NFL0 401 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 ISL2Q96A47 359 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 REPS1Q96D71 796 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 C5orf34Q96MH7 638 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 MRPL57Q9BQC6 102 aaKnown RBP10.2□□□□□ -0.78
TMEM116-215ENST00000552374 CENPKQ9BS16 269 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 HES7Q9BYE0 225 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 LRFN1Q9P244 771 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 ERRFI1Q9UJM3 462 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-215ENST00000552374 SLC5A6Q9Y289 635 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 CLCA3PQ9Y6N3 262 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 SPACA6W5XKT8 324 aa10.2□□□□□ -0.78
TMEM116-215ENST00000552374 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms