RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MARCKSL1P49006 195 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 MAN2A2P49641 1150 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 SSR4P51571 173 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PNLIPRP1P54315 467 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 WNT3P56703 355 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 OLR1P78380 273 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 ABATP80404 500 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 ZBED6P86452 979 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 HSPB2Q16082 182 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 FBXL19-AS1Q494R0 122 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 ANKRD20A4Q4UJ75 823 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 FASTKD1Q53R41 847 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 CATSPEREQ5SY80 951 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 WLSQ5T9L3 541 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 KCTD11Q693B1 232 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 DARS2Q6PI48 645 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 IL20RBQ6UXL0 311 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 RGS9BPQ6ZS82 235 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 RBM43Q6ZSC3 357 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 SEM1Q6ZVN7 128 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 ZNF534Q76KX8 674 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 OTOAQ7RTW8 1153 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 KIF18BQ86Y91 864 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 SLC13A5Q86YT5 568 aaPredicted RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 CDKL3Q8IVW4 592 aaPredicted RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 KLHDC8BQ8IXV7 354 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 LRRC75A-AS1Q8N1F1 130 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 FAM109AQ8N4B1 249 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 TMEM251Q8N6I4 163 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 KCT2Q8NC54 265 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 NAXEQ8NCW5 288 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PPFIBP2Q8ND30 876 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 NFAM1Q8NET5 270 aaPredicted RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 OR13J1Q8NGT2 312 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 OR4L1Q8NH43 312 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 MAGEC3Q8TD91 643 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 TMEM158Q8WZ71 300 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PMM1Q92871 262 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 SARAFQ96BY9 339 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 TBC1D20Q96BZ9 403 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PERPQ96FX8 193 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 CAPZA3Q96KX2 299 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PPP1R2P1Q96PQ5 205 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PANX3Q96QZ0 392 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 OR1F2PQ96R84 312 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 PKP4Q99569 1192 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 GOLPH3Q9H4A6 298 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 LRRC40Q9H9A6 602 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 LIN28AQ9H9Z2 209 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 HPF1Q9NWY4 346 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 SPRR3Q9UBC9 169 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 MTRF1LQ9UGC7 380 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 DRG1Q9Y295 367 aaKnown RBP4.97□□□□□ -1.61
HOXB3-213ENST00000552000 NAALAD2Q9Y3Q0 740 aa4.97□□□□□ -1.61
HOXB3-213ENST00000552000 SVEP1Q4LDE5 3571 aa4.96□□□□□ -1.61
HOXB3-213ENST00000552000 YLPM1P49750 1951 aaKnown RBP4.96□□□□□ -1.61
HOXB3-213ENST00000552000 KDM4EB2RXH2 506 aaPredicted RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 EEF1E1-BLOC1S5C9J1V9 151 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 MYO1CO00159 1063 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 CES2O00748 559 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 EEF1E1O43324 174 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 CHST10O43529 356 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 PSTPIP1O43586 416 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 KIF5CO60282 957 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 GLSO94925 669 aaPredicted RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 OR6B1O95007 311 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 METTL18O95568 372 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 CNOT4O95628 575 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 SLC16A8O95907 504 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 B3GALT4O96024 378 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 S100BP04271 92 aaPredicted RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 GABRA1P14867 456 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 ENDOUP21128 410 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 MAOAP21397 527 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 IL10P22301 178 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 COILP38432 576 aaPredicted RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 SOX3P41225 446 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 CLCN2P51788 898 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 AGFG1P52594 562 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 EIF3BP55884 814 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 EIF3EP60228 445 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 RPS15AP62244 130 aaKnown RBP4.96□□□□□ -1.62
HOXB3-213ENST00000552000 PRAMEP78395 509 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 BTG2P78543 158 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 RELAQ04206 551 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 SLC10A1Q14973 349 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 NR1I3Q14994 352 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 ARHGAP19Q14CB8 494 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 SLC18A3Q16572 532 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF750Q32MQ0 723 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 TSTD2Q5T7W7 516 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 THEMIS2Q5TEJ8 643 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 NDUFAF5Q5TEU4 345 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 PRSS57Q6UWY2 283 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 SEZ6L2Q6UXD5 910 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 GK5Q6ZS86 529 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 SLC26A11Q86WA9 606 aa4.96□□□□□ -1.62
HOXB3-213ENST00000552000 RHOT2Q8IXI1 618 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms