RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SNX8Q9Y5X2 465 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SESN1Q9Y6P5 492 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 LRRK1Q38SD2 2015 aa2.28□□□□□ -2.04
CPSF6-207ENST00000551516 SEC16AO15027 2179 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ATRQ13535 2644 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MYH11P35749 1972 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 FN1P02751 2386 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 A0A0U1RQS6 177 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 GTPBP10A4D1E9 387 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 VPS37CA5D8V6 355 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NEMP2A6NFY4 417 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 HSPB2A8KAH6 182 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 AGAP14A8MT82 685 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 AKR1B15C9JRZ8 316 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 H3BQV1 296 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 KDELR3O43731 214 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 HS6ST1O60243 411 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PLOD3O60568 738 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MAGEC1O60732 1142 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 HSF2BPO75031 334 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 DAB1O75553 588 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 GSRP00390 522 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 C9P02748 559 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MMP2P08253 660 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PRR35P0CG20 571 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PNMA6AP0CW24 399 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CBSLP0DN79 551 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 P4HA1P13674 534 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ETFAP13804 333 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 IL7RP16871 459 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NR1D1P20393 614 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ITGAXP20702 1163 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 EDN2P20800 178 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 IL4RP24394 825 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 TBXAS1P24557 533 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 AKT2P31751 481 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CCR1P32246 355 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CBSP35520 551 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 DCTP40126 519 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NNMTP40261 264 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ACADSBP45954 432 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CSNK1DP48730 415 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ARSEP51690 589 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 F2RL1P55085 397 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CDH12P55289 794 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MAZP56270 477 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 KIAA1024LP59773 190 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SRP54P61011 504 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 UBE2IP63279 158 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PNOCQ13519 176 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CDH18Q13634 790 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NFATC4Q14934 902 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 IRF4Q15306 451 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 INPP5JQ15735 1006 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 HSPB2Q16082 182 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SRSF7Q16629 238 aaKnown RBP eCLIP2.27□□□□□ -2.058e-10■■■■□ 21.9
CPSF6-207ENST00000551516 CLPPQ16740 277 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 UGP2Q16851 508 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 KLHL40Q2TBA0 621 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SLC25A52Q3SY17 297 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 TAF1BQ53T94 588 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 C2CD6Q53TS8 623 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 Q5PR19 223 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 BRMS1LQ5PSV4 323 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 C6orf141Q5SZD1 244 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF658Q5TYW1 1059 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 GKAP1Q5VSY0 366 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 FAM46CQ5VWP2 391 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF324BQ6AW86 544 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 LCN10Q6JVE6 187 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 LRRC8EQ6NSJ5 796 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 LCTLQ6UWM7 567 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SLC47A2Q86VL8 602 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ZSCAN30Q86W11 494 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 DENND6AQ8IWF6 608 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PYROXD2Q8N2H3 581 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SFRP1Q8N474 314 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ARL14Q8N4G2 192 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NPWQ8N729 165 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 LSMEM1Q8N8F7 131 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SLC38A9Q8NBW4 561 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 OR2AP1Q8NGE2 309 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 OR4D9Q8NGE8 314 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 JOSD2Q8TAC2 188 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PIH1D2Q8WWB5 315 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 OR8D1Q8WZ84 308 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 DPF1Q92782 380 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NAT6Q93015 286 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 TSACCQ96A04 125 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 RAB7BQ96AH8 199 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM159Q96B96 161 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MOAP1Q96BY2 351 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 FBXL8Q96CD0 374 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ARHGEF26Q96DR7 871 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SAT2Q96F10 170 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PPP1R13BQ96KQ4 1090 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PEBP4Q96S96 227 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SERINC2Q96SA4 455 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 RUFY1Q96T51 708 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms