RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 PRSS16Q9NQE7 514 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 MBNL1Q9NR56 388 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 ATAD3AQ9NVI7 634 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 SCN3BQ9NY72 215 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 GPR34Q9UPC5 381 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 TPRKBQ9Y3C4 175 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 PCDHGB1Q9Y5G3 927 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 PI15O43692 258 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 PPIBP23284 216 aaKnown RBP13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 OPRL1P41146 370 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 ALDH9A1P49189 494 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 NUDT6P53370 316 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 NCS1P62166 190 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 SPIBQ01892 262 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 FCHO2Q0JRZ9 810 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 TEAD4Q15561 434 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 ANKRD54Q6NXT1 300 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 C16orf87Q6PH81 154 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 SLC9B2Q86UD5 537 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 CXorf40AQ8TE69 158 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 HRASLS5Q96KN8 279 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 MACROD1Q9BQ69 325 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 ZNF717Q9BY31 904 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 EHD1Q9H4M9 534 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 ACOT13Q9NPJ3 140 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 MIEF1Q9NQG6 463 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 SERGEFQ9UGK8 458 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 CORO2BQ9UQ03 480 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
CALCOCO1-218ENST00000550804 FAM227AF5H4B4 570 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 PTX3P26022 381 aaPredicted RBP13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 PTGER1P34995 402 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 OPRD1P41143 372 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 MAPK9P45984 424 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 IDH2P48735 452 aaKnown RBP13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 SYT16Q17RD7 645 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 WSCD2Q2TBF2 565 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 TMEM236Q5W0B7 351 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 PNCKQ6P2M8 343 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 TNFAIP8L2Q6P589 184 aaPredicted RBP13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 Q6ZNX1 250 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 SUSD6Q92537 303 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 RAB8BQ92930 207 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 BORCS5Q969J3 196 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 ZNF300Q96RE9 604 aaPredicted RBP13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 MYADMQ96S97 322 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 MYNNQ9NPC7 610 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 GMEB1Q9Y692 573 aa13.52□□□□□ -0.24
CALCOCO1-218ENST00000550804 DOCK8Q8NF50 2099 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 RGS10O43665 173 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 B4GALT2O60909 372 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 PCDH8O95206 1070 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 RECKO95980 971 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 PIK3CBP42338 1070 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 TAS2R38P59533 333 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 ITGADQ13349 1161 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 RUNX3Q13761 415 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 EIF4HQ15056 248 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 PROX2Q3B8N5 592 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 TMEM52BQ4KMG9 183 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 OR10G2Q8NGC3 310 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 GTPBP3Q969Y2 492 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 WFDC6Q9BQY6 131 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 XKR8Q9H6D3 395 aa13.52□□□□□ -0.25
CALCOCO1-218ENST00000550804 PRR23AA6NEV1 266 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 E9PQ18 207 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 VEGFDO43915 354 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 IMPDH2P12268 514 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 GJA4P35212 333 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 DRD3P35462 400 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 IDUAP35475 653 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 CXCR4P61073 352 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 CDK3Q00526 305 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 PUM1Q14671 1186 aaKnown RBP eCLIP13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 IFI44LQ53G44 452 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 SYT6Q5T7P8 510 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 PIP5KL1Q5T9C9 394 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 ZNF765Q7L2R6 523 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 PDZD3Q86UT5 571 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 OR4C15Q8NGM1 316 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 UTP15Q8TED0 518 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 SETD7Q8WTS6 366 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 TM4SF18Q96CE8 201 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 CXorf40BQ96DE9 158 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 YIPF6Q96EC8 236 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 CHFRQ96EP1 664 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 PPP1R16AQ96I34 528 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 COX14Q96I36 57 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 ZNF514Q96K75 400 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 SPATA9Q9BWV2 254 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 LHX9Q9NQ69 397 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 ACER3Q9NUN7 267 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 HSPE1-MOB4S4R3N1 261 aa13.51□□□□□ -0.25
CALCOCO1-218ENST00000550804 PMF1-BGLAPU3KQ54 211 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms