RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 FOXM1Q08050 763 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 FAM174BQ3ZCQ3 159 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 MMEL1Q495T6 779 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.47■□□□□ 0.23
LETMD1-220ENST00000549686 CCDC157Q569K6 752 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 NDUFAF5Q5TEU4 345 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 ANXA8L1Q5VT79 327 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
LETMD1-220ENST00000549686 AMER3Q8N944 861 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 VPS37AQ8NEZ2 397 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 DNAJB8Q8NHS0 232 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 PPCDCQ96CD2 204 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 COQ8BQ96D53 544 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 LIN37Q96GY3 246 aaPredicted RBP16.47■□□□□ 0.23
LETMD1-220ENST00000549686 BHLHE41Q9C0J9 482 aaPredicted RBP16.47■□□□□ 0.23
LETMD1-220ENST00000549686 RMND5AQ9H871 391 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 FAM120CQ9NX05 1096 aaKnown RBP16.47■□□□□ 0.23
LETMD1-220ENST00000549686 NDE1Q9NXR1 346 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 TAS2R7Q9NYW3 318 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 DAPP1Q9UN19 280 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 PCDHB3Q9Y5E6 796 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 PCDHA9Q9Y5H5 950 aa16.47■□□□□ 0.23
LETMD1-220ENST00000549686 MDC1Q14676 2089 aaKnown RBP16.46■□□□□ 0.23
LETMD1-220ENST00000549686 A0A1B0GX78 115 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 DSCR3O14972 297 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 ZNF749O43361 778 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 PROM1O43490 865 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 FOXS1O43638 330 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 MT-CO3P00414 261 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 NPPAP01160 153 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 NR2F6P10588 404 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 CEACAM1P13688 526 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 CPN2P22792 545 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 LIM2P55344 173 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 HNRNPH2P55795 449 aaKnown RBP16.46■□□□□ 0.23
LETMD1-220ENST00000549686 RAB38P57729 211 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 RAB15P59190 212 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 TNFRSF17Q02223 184 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 UGT8Q16880 541 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 ISXQ2M1V0 245 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 VPS26BQ4G0F5 336 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 SPANXN4Q5MJ08 99 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 DGLUCYQ7Z3D6 616 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 PDSS2Q86YH6 399 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 SAMD14Q8IZD0 417 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-220ENST00000549686 EFCAB3Q8N7B9 438 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 POU5F2Q8N7G0 328 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 OR9A4Q8NGU2 314 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 GFM2Q969S9 779 aaKnown RBP16.46■□□□□ 0.23
LETMD1-220ENST00000549686 PHOX2BQ99453 314 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 SLC7A5P2Q9GIP4 190 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 SLC52A3Q9NQ40 469 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.46■□□□□ 0.23
LETMD1-220ENST00000549686 KCMF1Q9P0J7 381 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 PSME2Q9UL46 239 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
LETMD1-220ENST00000549686 A0A0A6YYC8 382 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 A0A1W2PR48 441 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 ERICH4A6NGS2 130 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 GABRR3A8MPY1 467 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 I3L1I5 382 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 SGK494L7N484 410 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 POLR1CO15160 346 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 RNH1P13489 461 aaKnown RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 CAPN3P20807 821 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 IL10P22301 178 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 HNRNPFP52597 415 aaKnown RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 ACTN3Q08043 901 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 RUNX2Q13950 521 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 PGS1Q32NB8 556 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 TIGD2Q4W5G0 525 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 RHBDD2Q6NTF9 364 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 HACD2Q6Y1H2 254 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 TTLL10Q6ZVT0 673 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 TMEM126BQ8IUX1 230 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 CA13Q8N1Q1 262 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 DPP10Q8N608 796 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 BMPERQ8N8U9 685 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 C7orf57Q8NEG2 295 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 ROPN1LQ96C74 230 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 OR52E6Q96RD3 313 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 MAPKAP1Q9BPZ7 522 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 ZPBPQ9BS86 351 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 DUSP26Q9BV47 211 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 C1orf21Q9H246 121 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 ACTR5Q9H9F9 607 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 OCIAD1Q9NX40 245 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 TEX10Q9NXF1 929 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 SH3BP4Q9P0V3 963 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 FBXW2Q9UKT8 454 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 EXO1Q9UQ84 846 aaKnown RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 CLCA2Q9UQC9 943 aa16.45■□□□□ 0.22
LETMD1-220ENST00000549686 MRPS33Q9Y291 106 aaKnown RBP16.45■□□□□ 0.22
LETMD1-220ENST00000549686 MRASO14807 208 aa16.44■□□□□ 0.22
LETMD1-220ENST00000549686 SLC30A4O14863 429 aa16.44■□□□□ 0.22
LETMD1-220ENST00000549686 TM4SF5O14894 197 aa16.44■□□□□ 0.22
LETMD1-220ENST00000549686 GFRA3O60609 400 aa16.44■□□□□ 0.22
LETMD1-220ENST00000549686 CSO75390 466 aaKnown RBP16.44■□□□□ 0.22
LETMD1-220ENST00000549686 RDH16O75452 317 aa16.44■□□□□ 0.22
LETMD1-220ENST00000549686 SCRG1O75711 98 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms