RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SOX14O95416 240 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 IGFBP1P08833 259 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 PIPP12273 146 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SSTR4P31391 388 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 VEPH1Q14D04 833 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 TCTN1Q2MV58 587 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 ANXA8L1Q5VT79 327 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 PRSS55Q6UWB4 352 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 CCDC149Q6ZUS6 474 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 RDH10Q8IZV5 341 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 APCDD1Q8J025 514 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 FAM46DQ8NEK8 389 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 OR5AK3PQ8NH89 298 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 GEMIN6Q8WXD5 167 aaKnown RBP13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SLC35A5Q9BS91 424 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 SAGE1Q9NXZ1 904 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 STUB1Q9UNE7 303 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
HDAC7-228ENST00000548938 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 GNG14A0A1W2PPG7 69 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 HYKKA2RU49 373 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 SMIM30A4D0T7 59 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MGAT4DA6NG13 374 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 PLD2O14939 933 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MPZL2O60487 215 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CDRT1O95170 752 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CLEC2LP0C7M8 214 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 GATMP50440 423 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 PCDH1Q08174 1060 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 LIPKQ5VXJ0 399 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 LIPJQ5W064 366 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ERAP2Q6P179 960 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CRTC1Q6UUV9 634 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 BCDIN3DQ7Z5W3 292 aaKnown RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 FAM181AQ8N9Y4 354 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 HJURPQ8NCD3 748 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 A0A0X1KG70 313 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 GFYI3L273 518 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 TLR4O00206 839 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 TPST2O60704 377 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MTX2O75431 263 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 C6orf47O95873 294 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 OR56A5P0C7T3 313 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 HTR2BP41595 481 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ASMTP46597 345 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ALDH9A1P49189 494 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 PRIM2P49643 509 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 EFR3AQ14156 821 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CAMKMTQ7Z624 323 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CAMKK1Q8N5S9 505 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ALG14Q96F25 216 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 SLC6A18Q96N87 628 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 FRMD6Q96NE9 622 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 POLR2J2Q9GZM3 115 aaKnown RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 RERGLQ9H628 205 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 RNF121Q9H920 327 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 GIMAP4Q9NUV9 329 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 NDUFB11Q9NX14 153 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MAP4K5Q9Y4K4 846 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 OR6C70A6NIJ9 312 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 RNASET2O00584 256 aaKnown RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 TMCC2O75069 709 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 RECKO95980 971 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ALPPP05187 535 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CHRM5P08912 532 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 P2RX3P56373 397 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CDK6Q00534 326 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CDH18Q13634 790 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 SLC35F1Q5T1Q4 408 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF770Q6IQ21 691 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 TAS1R1Q7RTX1 841 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 THOC6Q86W42 341 aaKnown RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 TAGAPQ8N103 731 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CBARPQ8N350 705 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 KLHL6Q8WZ60 621 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-228ENST00000548938 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 ENPP4Q9Y6X5 453 aa13.12□□□□□ -0.31
HDAC7-228ENST00000548938 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 FABP12A6NFH5 140 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 FADS2P1A8MWK0 482 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms