RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SLCO4C1Q6ZQN7 724 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 HTR3DQ70Z44 454 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 LAS2Q8IYD9 372 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 IL17RCQ8NAC3 791 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 KLHL6Q8WZ60 621 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 PPCDCQ96CD2 204 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TIFAQ96CG3 184 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MTERF3Q96E29 417 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM80Q96HE8 168 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ST6GAL2Q96JF0 529 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MND1Q9BWT6 205 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 BARHL1Q9BZE3 327 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 FAM83DQ9H4H8 585 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ZDHHC6Q9H6R6 413 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 RC3H2Q9HBD1 1191 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 STUB1Q9UNE7 303 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 KCNE2Q9Y6J6 123 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CEP350Q5VT06 3117 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ANKRD34BA5PLL1 514 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 HMX3A6NHT5 357 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TLR4O00206 839 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 NPC1O15118 1278 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 RGS5O15539 181 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 HOXC11O43248 304 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 BNIP3LO60238 219 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ENTPD6O75354 484 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SH3BGRLO75368 114 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CSO75390 466 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MFN2O95140 757 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC16A8O95907 504 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 OSMP13725 252 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CHI3L1P36222 383 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CTSOP43234 321 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CRYBB2P43320 205 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 RUNX1T1Q06455 604 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ILKQ13418 452 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 GANABQ14697 944 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CDK10Q15131 360 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF79Q15937 498 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC5A12Q1EHB4 618 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MPEG1Q2M385 716 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CYP27C1Q4G0S4 372 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SYTL3Q4VX76 610 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 RAVER1Q8IY67 606 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TAGAPQ8N103 731 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ASCC1Q8N9N2 400 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 FAM181AQ8N9Y4 354 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM159Q96B96 161 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 WDR34Q96EX3 536 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 LMLNQ96KR4 655 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 PKP4Q99569 1192 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 WRAP53Q9BUR4 548 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SRRQ9GZT4 340 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 RMI1Q9H9A7 625 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF334Q9HCZ1 680 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MYNNQ9NPC7 610 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 EXOSC4Q9NPD3 245 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 DDX28Q9NUL7 540 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 NDUFB11Q9NX14 153 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 GULP1Q9UBP9 304 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MUTYHQ9UIF7 546 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM98Q9Y2Y6 226 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 HYKKA2RU49 373 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM202A6NGA9 273 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 RECKO95980 971 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 IL7P13232 177 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 EPHB3P54753 998 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 C2orf80Q0P641 193 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 MLLT11Q13015 90 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 CLPPQ16740 277 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 CCSMST1Q4G0I0 132 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 C12orf73Q69YU5 71 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 FAM71E1Q6IPT2 247 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 DPY19L3Q6ZPD9 716 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 ARMCX6Q7L4S7 300 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 OTOP2Q7RTS6 562 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 COMMD6Q7Z4G1 85 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 TMPRSS11BQ86T26 416 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 TRAM1L1Q8N609 369 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 SIMC1Q8NDZ2 872 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 PROKR2Q8NFJ6 384 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 GPR151Q8TDV0 419 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 C17orf50Q8WW18 174 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 APOBEC4Q8WW27 367 aaKnown RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 NEIL2Q969S2 332 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 CIDECQ96AQ7 238 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 IGSF21Q96ID5 467 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 NEDD4LQ96PU5 975 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 UCK2Q9BZX2 261 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 PRM3Q9NNZ6 103 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 NFKBIL1Q9UBC1 381 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 REV1Q9UBZ9 1251 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 ACSL6Q9UKU0 697 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms