RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 IRF4Q15306 451 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 C9orf50Q5SZB4 431 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 KLHL35Q6PF15 583 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 ENTHD1Q8IYW4 607 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 SLC5A8Q8N695 610 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 SMYD1Q8NB12 490 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 ZNF540Q8NDQ6 660 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 LZICQ8WZA0 190 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 SMPDL3AQ92484 453 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 ZNF347Q96SE7 839 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 THSD1Q9NS62 852 aa17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 ZFR2Q9UPR6 939 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-208ENST00000548436 SNRNP200O75643 2136 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 ANKRD33BA6NCL7 494 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 BCAS1O75363 584 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 MT-ND2P03891 347 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 FUT4P22083 530 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 CXCR2P25025 360 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 ALDH9A1P49189 494 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 CDH12P55289 794 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 MLF2Q15773 248 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 PROX2Q3B8N5 592 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 ANKRD13BQ86YJ7 626 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 RAD21L1Q9H4I0 556 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 IGFLR1Q9H665 355 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 WDR26Q9H7D7 661 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 C5AR2Q9P296 337 aa17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 YBX2Q9Y2T7 364 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-208ENST00000548436 XIRP2A4UGR9 3374 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 CAPN5O15484 640 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 FAM20BO75063 409 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 VIPP01282 170 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 ACP5P13686 325 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 TRIM23P36406 574 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 GSSP48637 474 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 DSTNP60981 165 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 RPS26P62854 115 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 CTF1Q16619 201 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 EXOC3L2Q2M3D2 409 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 OR10G2Q8NGC3 310 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 HSPBAP1Q96EW2 488 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 ABHD8Q96I13 439 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 FERD3LQ96RJ6 166 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 INSM2Q96T92 566 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 KXD1Q9BQD3 176 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 NLNQ9BYT8 704 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 PCBD2Q9H0N5 130 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 SPATA7Q9P0W8 599 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 RAB23Q9ULC3 237 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 GOLGA4Q13439 2230 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 LCMT2O60294 686 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 ZBTB11O95625 1053 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 RECKO95980 971 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 MLLT10P55197 1068 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 ENPP2Q13822 863 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 AGERQ15109 404 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 ANKDD1AQ495B1 522 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 PLD3Q8IV08 490 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 CROCCP3Q8IVE0 287 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 TP53I13Q8NBR0 393 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 RORBQ92753 470 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 C12orf66Q96MD2 445 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 RNF6Q9Y252 685 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 ANGPT4Q9Y264 503 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 SH3GLB1Q9Y371 365 aa17.65■□□□□ 0.42
PRPF40B-208ENST00000548436 hCG_2014768A0A024R1R8 64 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 OR1F1O43749 312 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 TMPRSS11DO60235 418 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 MANFP55145 182 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 MICAQ29983 383 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 SAXO2Q658L1 398 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 CEACAM20Q6UY09 585 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 CCDC81Q6ZN84 652 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 PAGE2Q7Z2X7 111 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 UBE3DQ7Z6J8 389 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 YAF2Q8IY57 180 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 HORMAD2Q8N7B1 307 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 AMER3Q8N944 861 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 B4GALNT2Q8NHY0 566 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 GEMIN6Q8WXD5 167 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 UCN3Q969E3 161 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 NIPSNAP1Q9BPW8 284 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 OSGEPL1Q9H4B0 414 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 PREBQ9HCU5 417 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 ACSL5Q9ULC5 683 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
PRPF40B-208ENST00000548436 IGKV1-8A0A0C4DH67 115 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 PDPK1O15530 556 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 RGS10O43665 173 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 TBX19O60806 448 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 FADS2O95864 444 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 APODP05090 189 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 C5AR1P21730 350 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 PBX2P40425 430 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 EIF2DP41214 584 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 XCR1P46094 333 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 CSNK1G2P78368 415 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 DUSP7Q16829 419 aa17.63■□□□□ 0.41
PRPF40B-208ENST00000548436 RPS26P11Q5JNZ5 115 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms