RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PELI2Q9HAT8 420 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 IGSF5Q9NSI5 407 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ASIC3Q9UHC3 531 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ACAD8Q9UKU7 415 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 VWA7Q9Y334 891 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 MMACHCQ9Y4U1 282 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 KCNE2Q9Y6J6 123 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 ABCA4P78363 2273 aa11.1□□□□□ -0.63
TRAFD1-205ENST00000548277 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 NPEPPSL1A6NEC2 478 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 NCF1BA6NI72 391 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 TMEM200CA6NKL6 621 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 NCF1CA8MVU1 366 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CES2O00748 559 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CLDN4O14493 209 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 ERI3O43414 337 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 H2AFYO75367 372 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 WDR47O94967 919 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 SERPINA6P08185 405 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CELA3AP09093 270 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 GLI4P10075 376 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 NCF1P14598 390 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CNR1P21554 472 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 ACVR2AP27037 513 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 HNRNPH1P31943 449 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 ZFP36L2P47974 494 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 DNASE1L1P49184 302 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 DLX5P56178 289 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 RAB38P57729 211 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 STXBP1P61764 594 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CEBPEQ15744 281 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 FBXO48Q5FWF7 155 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 SPANXN3Q5MJ09 141 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 TEDDM1Q5T9Z0 273 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 KIAA0408Q6ZU52 694 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 FAM47EQ6ZV65 393 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 SLC22A16Q86VW1 577 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 SCUBE1Q8IWY4 988 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 KLHDC8AQ8IYD2 350 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 ARMC10Q8N2F6 343 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 DOK4Q8TEW6 326 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CERS2Q96G23 380 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 SCYL1Q96KG9 808 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 GPATCH1Q9BRR8 931 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 POLDIP3Q9BY77 421 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 OR8D2Q9GZM6 311 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 GSX1Q9H4S2 264 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 SEMA4BQ9NPR2 832 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 MYOTQ9UBF9 498 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 Q9UFV3 132 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 CLCA3PQ9Y6N3 262 aa11.09□□□□□ -0.63
TRAFD1-205ENST00000548277 B3GALT2O43825 422 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF354AO60765 605 aaPredicted RBP11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 LDB3O75112 727 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 SH3BGRLO75368 114 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 TTC4O95801 387 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 C1GALT1C1LP0DN25 315 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 KLK2P20151 261 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 CERS1P27544 350 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ADH7P40394 386 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 MAN2A2P49641 1150 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 HK2P52789 917 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ID2Q02363 134 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 STX4Q12846 297 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF460Q14592 562 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 RTL6Q6ICC9 239 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ADNP2Q6IQ32 1131 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM45BPQ6NSW5 357 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 SBSNQ6UWP8 590 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ARSKQ6UWY0 536 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 HSDL2Q6YN16 418 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 B3GNT6Q6ZMB0 384 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 MMP21Q8N119 569 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 TMEM251Q8N6I4 163 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM45AQ8TCE6 357 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 SLCO2A1Q92959 643 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 GAL3ST3Q96A11 431 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 MS4A6EQ96DS6 147 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 CAPZA3Q96KX2 299 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 RUNDC3BQ96NL0 473 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 CSF3RQ99062 836 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ALOXE3Q9BYJ1 711 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 CLK4Q9HAZ1 481 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ADAP2Q9NPF8 381 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 CHMP2BQ9UQN3 213 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 PLEKHA6Q9Y2H5 1048 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM215AQ9Y5M1 114 aa11.08□□□□□ -0.64
TRAFD1-205ENST00000548277 ANKDD1BA6NHY2 528 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 CLGNO14967 610 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 P04436 131 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 ENO2P09104 434 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 HOXB4P17483 251 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TCP1P17987 556 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 IVDP26440 423 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms