RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SLC35A5Q9BS91 424 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 RAB33BQ9H082 229 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 SLC35C2Q9NQQ7 365 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 C1GALT1Q9NS00 363 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 ADPRHL2Q9NX46 363 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 MUTYHQ9UIF7 546 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 PILRAQ9UKJ1 303 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 POMT2Q9UKY4 750 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 FAF1Q9UNN5 650 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 EXO1Q9UQ84 846 aaKnown RBP12.78□□□□□ -0.36
PTCH1-215ENST00000547672 ENTPD4Q9Y227 616 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 BTBD3Q9Y2F9 522 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF780BQ9Y6R6 833 aa12.78□□□□□ -0.36
PTCH1-215ENST00000547672 YKT6O15498 198 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 KCNK5O95279 499 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 BMP10O95393 424 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 C6orf47O95873 294 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 PROS1P07225 676 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 NCK1P16333 377 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 MAGP20916 626 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 CDH3P22223 829 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 MAOBP27338 520 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 FRKP42685 505 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 GPR3P46089 330 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 CCT8P50990 548 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 CLCN2P51788 898 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 HBA1P69905 142 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 BTN3A2P78410 334 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 MC1RQ01726 317 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 GNA13Q14344 377 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 TCEA2Q15560 299 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 ATP6AP1Q15904 470 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 NDUFA9Q16795 377 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 C14orf28Q4W4Y0 310 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 TMTC4Q5T4D3 741 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 NDUFAF5Q5TEU4 345 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 ANKRD26P1Q6NSI1 321 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 ZBTB49Q6ZSB9 765 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 RNF44Q7L0R7 432 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 C17orf82Q86X59 251 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 PDSS2Q86YH6 399 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 C7orf57Q8NEG2 295 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 JPH3Q8WXH2 748 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 LRTOMTQ8WZ04 291 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 LZICQ8WZA0 190 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 SLCO4A1Q96BD0 722 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 SDCCAG3Q96C92 435 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 PYURFQ96I23 114 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 TEFMQ96QE5 360 aaKnown RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 NR1H4Q96RI1 486 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 NRTNQ99748 197 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 DPH2Q9BQC3 489 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 CHID1Q9BWS9 393 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 OSBPL10Q9BXB5 764 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 NPLQ9BXD5 320 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-215ENST00000547672 CHRNA10Q9GZZ6 450 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 TMEM38AQ9H6F2 299 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 LYRM4Q9HD34 91 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 AGPAT4Q9NRZ5 378 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 RAB26Q9ULW5 256 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 ASB4Q9Y574 426 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 SLC22A7Q9Y694 548 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 CDH23Q9H251 3354 aa12.77□□□□□ -0.37
PTCH1-215ENST00000547672 BLACEA4D250 179 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 RTCAO00442 366 aaKnown RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 PROM1O43490 865 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 TMPRSS11DO60235 418 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 PIAS2O75928 621 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 KLHL18O94889 574 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 CSNK2A2P19784 350 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 KDELR2P33947 212 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 CNR2P34972 360 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 PCGF2P35227 344 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 CRATP43155 626 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 CSNK1EP49674 416 aaKnown RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 PCBP4P57723 403 aaKnown RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 HYAL2Q12891 473 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 MED21Q13503 144 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 SPIDRQ14159 915 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 MYBPC3Q14896 1274 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 SPDYE7PQ495Y7 208 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 GTDC1Q4AE62 458 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 GCNT6Q5T4J0 391 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 LPCAT4Q643R3 524 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 FCRL6Q6DN72 434 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 UTP15Q8TED0 518 aaKnown RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 EDAQ92838 391 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 DUSP23Q9BVJ7 150 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 SORBS1Q9BX66 1292 aaKnown RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 KLHL31Q9H511 634 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 RPF2Q9H7B2 306 aaKnown RBP12.76□□□□□ -0.37
PTCH1-215ENST00000547672 C3orf14Q9HBI5 128 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 PRDM6Q9NQX0 595 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 UTS2RQ9UKP6 389 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 PADI4Q9UM07 663 aa12.76□□□□□ -0.37
PTCH1-215ENST00000547672 NEUROG3Q9Y4Z2 214 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms