RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SEC16BQ96JE7 1060 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 MAGEB10Q96LZ2 347 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 C10orf90Q96M02 699 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SLC46A1Q96NT5 459 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 PAIP2Q9BPZ3 127 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TRMOQ9BU70 441 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 NTMT1Q9BV86 223 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 GATA5Q9BWX5 397 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 NLNQ9BYT8 704 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SLC29A3Q9BZD2 475 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 B3GNT4Q9C0J1 378 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ACTR5Q9H9F9 607 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 DMRT3Q9NQL9 472 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SUCOQ9UBS9 1254 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 TRPS1Q9UHF7 1281 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ZFP69BQ9UJL9 534 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SERTAD3Q9UJW9 196 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 ACSL6Q9UKU0 697 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 RUVBL1Q9Y265 456 aaKnown RBP6.02□□□□□ -1.45
PRKDC-211ENST00000546304 RNF11Q9Y3C5 154 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 AP1M2Q9Y6Q5 423 aa6.02□□□□□ -1.45
PRKDC-211ENST00000546304 SCN2AQ99250 2005 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ATMQ13315 3056 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 A0A1B0GX78 115 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TMEM82A0PJX8 343 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 WDR91A4D1P6 747 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TMEM114B3SHH9 223 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 H0YIV9 168 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 STMND1H3BQB6 276 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 H3BQF6 201 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 PPP6CO00743 305 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TXNDC9O14530 226 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 UBFD1O14562 309 aaKnown RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 FFAR3O14843 346 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 GPR42O15529 346 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF749O43361 778 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 LCMT2O60294 686 aaKnown RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 NPHS1O60500 1241 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CRCPO75575 148 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 OR4F21O95013 312 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ESRRBO95718 433 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SERPIND1P05546 499 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CAPN1P07384 714 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CHRNGP07510 517 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SERPINA6P08185 405 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 PCNAP12004 261 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF28P17035 718 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 BGNP21810 368 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 HMOX2P30519 316 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SLC5A2P31639 672 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 RORAP35398 523 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CCR10P46092 362 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ERVPABLB-1P60509 514 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 PHEXP78562 749 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 IFT88Q13099 833 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 GPS2Q13227 327 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 DDX39BQ13838 428 aaKnown RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ZRSR2Q15696 482 aaKnown RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 HIST2H2ACQ16777 129 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 MUM1Q2TAK8 710 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TCHHL1Q5QJ38 904 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 WASHC2DQ5SRD0 308 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 C10orf62Q5T681 223 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 PRAMEF17Q5VTA0 474 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 YOD1Q5VVQ6 348 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 GARNL3Q5VVW2 1013 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 FAM219BQ5XKK7 198 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 FRG2Q64ET8 278 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 HIST2H2AA3Q6FI13 130 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 RHBDD2Q6NTF9 364 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 FBXO42Q6P3S6 717 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 MILR1Q7Z6M3 343 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SYVN1Q86TM6 617 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CUZD1Q86UP6 607 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 NUDCD3Q8IVD9 361 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ARHGEF39Q8N4T4 335 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CDYL2Q8N8U2 506 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CAMKVQ8NCB2 501 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TRPV3Q8NET8 790 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 OR7G3Q8NG95 312 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 OR6Y1Q8NGX8 325 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 HUS1BQ8NHY5 278 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 MDM1Q8TC05 714 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 NT5CQ8TCD5 201 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 PROKR1Q8TCW9 393 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SLC13A3Q8WWT9 602 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CCT6BQ92526 530 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF578Q96N58 590 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 FRG2BQ96QU4 278 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 KCNA7Q96RP8 456 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 NDC1Q9BTX1 674 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SLC7A5P2Q9GIP4 190 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 SPRTNQ9H040 489 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 RNF32Q9H0A6 362 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 RHBGQ9H310 441 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ELOVL6Q9H5J4 265 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 NT5DC2Q9H857 520 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 MID1IP1Q9NPA3 183 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 STARD5Q9NSY2 213 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 CUTCQ9NTM9 273 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms