RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 WDR34Q96EX3 536 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 TTTY12Q9BZ98 90 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 NT5DC2Q9H857 520 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 LIN28AQ9H9Z2 209 aaKnown RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 PNPLA3Q9NST1 481 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 MOCS1Q9NZB8 636 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 COQ3Q9NZJ6 369 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 MYOTQ9UBF9 498 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 YARS2Q9Y2Z4 477 aaKnown RBP11.65□□□□□ -0.54
COPS7A-221ENST00000546229 DYRK1BQ9Y463 629 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 KCNE2Q9Y6J6 123 aa11.65□□□□□ -0.54
COPS7A-221ENST00000546229 ACANP16112 2415 aa11.65□□□□□ -0.55
COPS7A-221ENST00000546229 FLNAP21333 2647 aaKnown RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 FAM95CA0A1B0GW59 222 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 GOLGA6L6A8MZA4 724 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 E7ESA3 106 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 FANCGO15287 622 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 CDC40O60508 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 CLEC3AO75596 197 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 SCELO95171 688 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 C1QAP02745 245 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 CELA3AP09093 270 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 GSTM2P28161 218 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 GGT5P36269 586 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 HNMTP50135 292 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 LIM2P55344 173 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 DLX5P56178 289 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 STXBP1P61764 594 aaKnown RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 MORF4L2Q15014 288 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 RBBP5Q15291 538 aaKnown RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 HYAL4Q2M3T9 481 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 LYPD8Q6UX82 237 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 TMIGD1Q6UXZ0 262 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF595Q8IYB9 648 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 OR2L5Q8NG80 312 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 NRGNQ92686 78 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 CFAP36Q96G28 342 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 SCYL1Q96KG9 808 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 CAPZA3Q96KX2 299 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 TRIM54Q9BYV2 358 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 CXXC4Q9H2H0 198 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 EHD1Q9H4M9 534 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 TIMMDC1Q9NPL8 285 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 PRDM7Q9NQW5 492 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 PNO1Q9NRX1 252 aaKnown RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 ASIC3Q9UHC3 531 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 FBXW2Q9UKT8 454 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF490Q9ULM2 529 aaPredicted RBP11.64□□□□□ -0.55
COPS7A-221ENST00000546229 SNX12Q9UMY4 172 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 DAPP1Q9UN19 280 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 L3MBTL1Q9Y468 752 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 AKAP6Q13023 2319 aa11.64□□□□□ -0.55
COPS7A-221ENST00000546229 ARHGAP21Q5T5U3 1957 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 FAM166BA8MTA8 275 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 KLK8O60259 260 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 ZFAND5O76080 213 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 PDE9AO76083 593 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 WDR47O94967 919 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 NADKO95544 446 aaPredicted RBP11.63□□□□□ -0.55
COPS7A-221ENST00000546229 GNAZP19086 355 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 ADH7P40394 386 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 IGLV3-21P80748 117 aaPredicted RBP11.63□□□□□ -0.55
COPS7A-221ENST00000546229 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 TGFBIQ15582 683 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 TMEM211Q6ICI0 200 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 TRILQ7L0X0 811 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 CLNKQ7Z7G1 428 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 ADAMTSL2Q86TH1 951 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 LIX1LQ8IVB5 337 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 TMEM156Q8N614 296 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 TMEM251Q8N6I4 163 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 TTLQ8NG68 377 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 OR8K3Q8NH51 312 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 RND1Q92730 232 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 LRRC39Q96DD0 335 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 POM121Q96HA1 1249 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 PITHD1Q9GZP4 211 aaPredicted RBP11.63□□□□□ -0.55
COPS7A-221ENST00000546229 DEFB127Q9H1M4 99 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 IGSF5Q9NSI5 407 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 VTI1BQ9UEU0 232 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 KCNN3Q9UGI6 736 aa11.63□□□□□ -0.55
COPS7A-221ENST00000546229 A0A0G2JNJ9 132 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 FAM221AA4D161 298 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 OR14I1A6ND48 311 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 A8MVJ9 347 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 G3V3Y1 287 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 WWP2O00308 870 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 SEC31AO94979 1220 aaKnown RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 ETHE1O95571 254 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 IGKV3-11P04433 115 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 GLI4P10075 376 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 CCL3P10147 92 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 DNAJA1P31689 397 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms