RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 B3GAT2Q9NPZ5 323 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 MAST2Q6P0Q8 1798 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GNB5O14775 395 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 APOC1P02654 83 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GADD45AP24522 165 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 C2orf27AQ580R0 203 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 FAM182AQ5T1J6 154 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 DPY19L3Q6ZPD9 716 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 UBE2J2Q8N2K1 259 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 KDM1BQ8NB78 822 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 SDR39U1Q9NRG7 319 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 TMLHEQ9NVH6 421 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 KCNK6Q9Y257 313 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR6C70A6NIJ9 312 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR5K4A6NMS3 321 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF701M0R085 212 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 SOX14O95416 240 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 HOXB2P14652 356 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF182P17025 639 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR4D2P58180 307 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 TBPL1P62380 186 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 SH3BP2P78314 561 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 NPRL3Q12980 569 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ITPRIPL2Q3MIP1 535 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 LDLRAD1Q5T700 205 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 ASPGQ86U10 573 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR2T33Q8NG76 320 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 OR4K1Q8NGD4 311 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 SLC25A36Q96CQ1 311 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 SLC12A9Q9BXP2 914 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 PELI2Q9HAT8 420 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 GRHPRQ9UBQ7 328 aa12.04□□□□□ -0.48
COL4A6-209ENST00000545689 A0A075B6Q4 140 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 UNC119BA6NIH7 251 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 LRRN3E7EW58 273 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PRKYO43930 277 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PPM1BO75688 479 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 KAT7O95251 611 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 HSD11B1P28845 292 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 HOXC12P31275 282 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ARSDP51689 593 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 SLC3A1Q07837 685 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PPP1R8Q12972 351 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 CTC1Q2NKJ3 1217 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 C4orf46Q504U0 113 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 SUSD1Q6UWL2 747 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 OR8H3Q8N146 312 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 LRRN3Q9H3W5 708 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 CFAP20Q9Y6A4 193 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 AGRPO00253 132 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 XPNPEP2O43895 674 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 MAZP56270 477 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PRAMEF17Q5VTA0 474 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 GRHL2Q6ISB3 625 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 KDELC1Q6UW63 502 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ASB18Q6ZVZ8 466 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 OR2L3Q8NG85 312 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 FIBINQ8TAL6 211 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 LRRC20Q8TCA0 184 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ADAMTS18Q8TE60 1221 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 COQ8BQ96D53 544 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 NXPE2Q96DL1 559 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 C17orf62Q9BQA9 187 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PLAGL1Q9UM63 463 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ERVK-11Q9UQG0 969 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 SOCS2O14508 198 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 SCAMP1O15126 338 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 FLRT2O43155 660 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 RAB8AP61006 207 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 RPS15AP62244 130 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 DOC2AQ14183 400 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PON2Q15165 354 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 CNTN4Q8IWV2 1026 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PLA2G15Q8NCC3 412 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 CNIH3Q8TBE1 160 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 HMGB4Q8WW32 186 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 RDH14Q9HBH5 336 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 SMURF1Q9HCE7 757 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PAK1IP1Q9NWT1 392 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 C19orf25Q9UFG5 118 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 MYH13Q9UKX3 1938 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 RPL10P27635 214 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 OR12D2P58182 307 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 LSAMPQ13449 338 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PLEKHG7Q6ZR37 379 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 INO80EQ8NBZ0 244 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 OR5T3Q8NGG3 340 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 CERS4Q9HA82 394 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 BRF2Q9HAW0 419 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 STOX2Q9P2F5 926 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 KLHL42Q9P2K6 505 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 GNG8Q9UK08 70 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PCDHGA12O60330 932 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 MADCAM1Q13477 382 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 INAVAQ3KP66 663 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ANKDD1AQ495B1 522 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms