RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CR2P20023 1033 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 FSHRP23945 695 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RPL10P27635 214 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 SHMT2P34897 504 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 NUDT6P53370 316 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RAB2AP61019 212 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ZXDBP98169 803 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 NPRL3Q12980 569 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 SYT16Q17RD7 645 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CYP27C1Q4G0S4 372 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TOR1AIP1Q5JTV8 583 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TPRG1LQ5T0D9 272 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 DDI2Q5TDH0 399 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CD300LGQ6UXG3 332 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 Q6ZSR9 355 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 USP30Q70CQ3 517 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TRIM46Q7Z4K8 759 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 VTCN1Q7Z7D3 282 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 FAM124AQ86V42 546 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TMEM25Q86YD3 366 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 ZNF683Q8IZ20 524 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 BPIFB1Q8TDL5 484 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 C16orf78Q8WTQ4 265 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 SETD7Q8WTS6 366 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 SMPDL3AQ92484 453 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 UFD1Q92890 307 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RFKQ969G6 155 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 POLR2J3Q9H1A7 115 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 FAIMQ9NVQ4 179 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MED11Q9P086 117 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 MGAT4BQ9UQ53 548 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 DLGAP4Q9Y2H0 992 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 PRKAB1Q9Y478 270 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 A0A1B0GVG6 124 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC30A4O14863 429 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 VEGFDO43915 354 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 HNRNPA1P09651 372 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS50-220ENST00000544910 GSTM3P21266 225 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MATN1P21941 496 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SKP1P63208 163 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CDK5R2Q13319 367 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 EIPR1Q53HC9 387 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CHMP1BQ7LBR1 199 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 GALNT12Q8IXK2 581 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ASB11Q8WXH4 323 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PAK6Q9NQU5 681 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 NFKBIL1Q9UBC1 381 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLCO3A1Q9UIG8 710 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ERVK-11Q9UQG0 969 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CFAP20Q9Y6A4 193 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 A0A0X1KG70 313 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ACOX3O15254 700 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 TBX1O43435 398 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ADH1BP00325 375 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 TFPTP0C1Z6 253 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ACP5P13686 325 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 BMP7P18075 431 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 RGS8P57771 180 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 RAPSNQ13702 412 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PDGFRLQ15198 375 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 AKIRIN2Q53H80 203 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 UNC5DQ6UXZ4 953 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 B3GNT8Q7Z7M8 397 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 RANBP3LQ86VV4 465 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 SPARTQ8N0X7 666 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 OR52N2Q8NGI0 321 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 NR4A3Q92570 626 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 TFGQ92734 400 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZC3H10Q96K80 434 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 TAS2R7Q9NYW3 318 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 RHCGQ9UBD6 479 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 AP1M2Q9Y6Q5 423 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF646O15015 1829 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 WWP2O00308 870 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 B3GALT2O43825 422 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 OR10H2O60403 315 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 RAB36O95755 333 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 F11P03951 625 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 AGXTP21549 392 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC5A2P31639 672 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ALDH3B2P48448 385 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ERVK-21P61565 698 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CD47Q08722 323 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 E2F2Q14209 437 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CARTPTQ16568 116 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 TMEM44Q2T9K0 475 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 GARNL3Q5VVW2 1013 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 KLHL35Q6PF15 583 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ERN2Q76MJ5 926 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 PRSS48Q7RTY5 328 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC22A16Q86VW1 577 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 TSPYL5Q86VY4 417 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 TMEM173Q86WV6 379 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 HS3ST5Q8IZT8 346 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CHDHQ8NE62 594 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 BBS10Q8TAM1 723 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 POF1BQ8WVV4 589 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 KLHL6Q8WZ60 621 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms