RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MCHR1Q99705 422 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 NSUN3Q9H649 340 aaKnown RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 REV1Q9UBZ9 1251 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 AHSA1O95433 338 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 CNOT4O95628 575 aaKnown RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 IFNA5P01569 189 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 DNASE1P24855 282 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 PREPP48147 710 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 GLT8D1Q68CQ7 371 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 DCDC5Q6ZRR9 648 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 TTLL10Q6ZVT0 673 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 GLIS1Q8NBF1 620 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 ZDHHC1Q8WTX9 485 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 KLRG1Q96E93 195 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 BCAS3Q9H6U6 928 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 C9J4A7 227 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 OR2B3O76000 313 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 OR12D1P0DN82 309 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 FAM189A2Q15884 450 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 EXOC3L2Q2M3D2 409 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 PIGGQ5H8A4 983 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 EGFL6Q8IUX8 553 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 ZFP41Q8N8Y5 198 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 SLC35B2Q8TB61 432 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 KCNN1Q92952 543 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 ZNF514Q96K75 400 aaPredicted RBP14.9□□□□□ -0.02
CHD4-210ENST00000544040 SLC29A3Q9BZD2 475 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 CDC14AQ9UNH5 594 aa14.9□□□□□ -0.02
CHD4-210ENST00000544040 LATS1O95835 1130 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 RAB5BP61020 215 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 KCNC4Q03721 635 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ABRAXAS2Q15018 415 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ZNF630Q2M218 657 aaPredicted RBP14.89□□□□□ -0.03
CHD4-210ENST00000544040 PHB2Q99623 299 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 PCDH17O14917 1159 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 DLDP09622 509 aaKnown RBP14.89□□□□□ -0.03
CHD4-210ENST00000544040 MAP2K3P46734 347 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 RBM39Q14498 530 aaKnown RBP14.89□□□□□ -0.03
CHD4-210ENST00000544040 ZNF648Q5T619 568 aaPredicted RBP14.89□□□□□ -0.03
CHD4-210ENST00000544040 C17orf62Q9BQA9 187 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 GLS2Q9UI32 602 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 MGAT4BQ9UQ53 548 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 PCDHGA8Q9Y5G5 932 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 HS3ST4Q9Y661 456 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 OR6C74A6NCV1 312 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 TYRP1P17643 537 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ZNF181Q2M3W8 571 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ZNF678Q5SXM1 525 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ZNF550Q7Z398 422 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 GALNT10Q86SR1 603 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 COMMD7Q86VX2 200 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 OR13C3Q8NGS6 347 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 RPLP0P6Q8NHW5 317 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 MMP27Q9H306 513 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 FAM120CQ9NX05 1096 aaKnown RBP14.89□□□□□ -0.03
CHD4-210ENST00000544040 VWDEQ8N2E2 1590 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 PDYNP01213 254 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ABHD18Q0P651 414 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 CTC1Q2NKJ3 1217 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
CHD4-210ENST00000544040 DHDHQ9UQ10 334 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 DLGAP4Q9Y2H0 992 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 WDR45Q9Y484 360 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 GSTM2P28161 218 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 SGCAQ16586 387 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 TMPRSS12Q86WS5 348 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 FAM217AQ8IXS0 508 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 ARL14Q8N4G2 192 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 CD244Q9BZW8 370 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 TAS2R9Q9NYW1 312 aa14.89□□□□□ -0.03
CHD4-210ENST00000544040 UPK3BL1B0FP48 263 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 UPK3BL2E5RIL1 263 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 HCRTO43612 131 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 RAD51DO75771 328 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 AMY2BP19961 511 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 DHPSP49366 369 aaPredicted RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 TRAM2Q15035 370 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 TMIGD1Q6UXZ0 262 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 CD99L2Q8TCZ2 262 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 SRRDQ9UH36 339 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 EBF1Q9UH73 591 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 ZNF850A8MQ14 1090 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 H0YJX3 145 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 H2BFMP0C1H6 154 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 GKP32189 559 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 KCNQ1P51787 676 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 NATD1Q8N6N6 113 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 ELP5Q8TE02 316 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 ZNF317Q96PQ6 595 aaPredicted RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 SECISBP2Q96T21 854 aaKnown RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 EPHA6Q9UF33 1036 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 ZNF860A6NHJ4 632 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 MAS1P04201 325 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 CBSLP0DN79 551 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 CTHP32929 405 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 CBSP35520 551 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 NIPAL4Q0D2K0 466 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 FLYWCH1Q4VC44 716 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms