RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 STX4Q12846 297 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 RUNX2Q13950 521 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 SERTAD2Q14140 314 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 DOC2AQ14183 400 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 OR4D1Q15615 310 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
RTN3-213ENST00000543552 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
RTN3-213ENST00000543552 TMEM35AQ53FP2 167 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 GRTP1Q5TC63 336 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 ABHD17CQ6PCB6 329 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 CCDC91Q7Z6B0 441 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 TBC1D1Q86TI0 1168 aaPredicted RBP12.24□□□□□ -0.45
RTN3-213ENST00000543552 SPATA6LQ8N4H0 392 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 OR14A16Q8NHC5 309 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 STAG3L4Q8TBR4 150 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 PHF10Q8WUB8 498 aaKnown RBP12.24□□□□□ -0.45
RTN3-213ENST00000543552 NCLNQ969V3 563 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 UBXN10Q96LJ8 280 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 QRFPRQ96P65 431 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 CENPKQ9BS16 269 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 UNKQ9C0B0 810 aaKnown RBP12.24□□□□□ -0.45
RTN3-213ENST00000543552 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 NMRAL1Q9HBL8 299 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 LYRM4Q9HD34 91 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 ERVK-11Q9UQG0 969 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
RTN3-213ENST00000543552 CCDC189A1A4V9 331 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
RTN3-213ENST00000543552 E9PLN8 166 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 TAPBPO15533 448 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 RAD51CO43502 376 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 CTNSO60931 367 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 PIAS1O75925 651 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 TUBB4AP04350 444 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 CERS1P27544 350 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 LIM2P55344 173 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 HSDL2Q6YN16 418 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
RTN3-213ENST00000543552 MORN4Q8NDC4 146 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 AGAP11Q8TF27 550 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 EXT2Q93063 718 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 VKORC1Q9BQB6 163 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 TBCDQ9BTW9 1192 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
RTN3-213ENST00000543552 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
RTN3-213ENST00000543552 ADGRG4Q8IZF6 3080 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 SYCE1LA8MT33 242 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 A8MVJ9 347 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 SUPT3HB4E1H0 165 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ACOT7O00154 380 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 CYR61O00622 381 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 DYRK3O43781 588 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 PEX1O43933 1283 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 KERAO60938 352 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 SUPT3HO75486 399 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 CLDN14O95500 239 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 COX7A2P14406 83 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
RTN3-213ENST00000543552 PTGS2P35354 604 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 CASP2P42575 452 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 MSH2P43246 934 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 PLTPP55058 493 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 CHIT1Q13231 466 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 MED27Q6P2C8 311 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 PAOXQ6QHF9 649 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 CHSY3Q70JA7 882 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 CCDC25Q86WR0 208 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ZNF227Q86WZ6 799 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
RTN3-213ENST00000543552 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ALG9Q9H6U8 611 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 HPF1Q9NWY4 346 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 GRHL1Q9NZI5 618 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 VTI1BQ9UEU0 232 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 ZNF490Q9ULM2 529 aaPredicted RBP12.22□□□□□ -0.45
RTN3-213ENST00000543552 PYCARDQ9ULZ3 195 aa12.22□□□□□ -0.45
RTN3-213ENST00000543552 K7EPI3 171 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
RTN3-213ENST00000543552 PRF1P14222 555 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 TNNI3P19429 210 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 HIST1H1TP22492 207 aaPredicted RBP12.21□□□□□ -0.45
RTN3-213ENST00000543552 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 CASQ1P31415 396 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 SSR2P43308 183 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 MAGEA4P43358 317 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms