RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 DEFB109BQ30KR1 87 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 TUBB8Q3ZCM7 444 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ATP1A1-AS1Q5TC04 95 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ZNF517Q6ZMY9 492 aaPredicted RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 ZNF793Q6ZN11 406 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 COMMD6Q7Z4G1 85 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 UBE3DQ7Z6J8 389 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 CLNKQ7Z7G1 428 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 GPR180Q86V85 440 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ZC3H7AQ8IWR0 971 aaKnown RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 METTL4Q8N3J2 472 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 FAM76AQ8TAV0 307 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 TUBGCP3Q96CW5 907 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 APIPQ96GX9 242 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 PTCHD1Q96NR3 888 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 OR1F2PQ96R84 312 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SPSB2Q99619 263 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 MAPKAP1Q9BPZ7 522 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ARHGAP9Q9BRR9 750 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 EBPLQ9BY08 206 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ACPTQ9BZG2 426 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SLC26A1Q9H2B4 701 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ZNF395Q9H8N7 513 aaPredicted RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 LRTM1Q9HBL6 345 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 LYRM4Q9HD34 91 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 TNFRSF12AQ9NP84 129 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 PRTFDC1Q9NRG1 225 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SEMA3GQ9NS98 782 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SLC22A11Q9NSA0 550 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 PNPOQ9NVS9 261 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 C1orf109Q9NX04 203 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 MS4A12Q9NXJ0 267 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 MARCOQ9UEW3 520 aaPredicted RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 C19orf25Q9UFG5 118 aaPredicted RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 PPT2Q9UMR5 302 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 DAPP1Q9UN19 280 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 MAN2B2Q9Y2E5 1009 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 DNAJC15Q9Y5T4 150 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 KNTC1P50748 2209 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SCN2AQ99250 2005 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 CCDC88CQ9P219 2028 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 FREM2Q5SZK8 3169 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ATP6AP2A0A1C7CYW4 349 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 SERTM1A2A2V5 107 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 BLACEA4D250 179 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 OR2W5A6NFC9 320 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ARGFXA6NJG6 315 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 VSTM2BA6NLU5 285 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 TRPC5OSA6NMA1 111 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 A8MUA0 341 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 SLCO1B7G3V0H7 640 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 K7ENP7 123 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CNOT3O75175 753 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 PEX11AO75192 247 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ALOX12BO75342 701 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ATP6AP2O75787 350 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 KLF7O75840 302 aaPredicted RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 RSL1D1O76021 490 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 ONECUT2O95948 504 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 IFNA16P05015 189 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ANXA4P09525 319 aaPredicted RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 NR2F6P10588 404 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ACPPP15309 386 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 TNNI3P19429 210 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 WT1P19544 449 aaPredicted RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 MMP11P24347 488 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 MAPK1P28482 360 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 PPP2R1BP30154 601 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 TIA1P31483 386 aaKnown RBP eCLIP5.95□□□□□ -1.46
LTBR-212ENST00000543542 BSGP35613 385 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 RRADP55042 308 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 OR4D2P58180 307 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 RPL38P63173 70 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 TNFRSF17Q02223 184 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 IL10RAQ13651 578 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 NSDHLQ15738 373 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 UGT8Q16880 541 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ATP6AP1LQ52LC2 224 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 C6orf163Q5TEZ5 329 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 IRAK1BP1Q5VVH5 260 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CES4AQ5XG92 561 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 NXNQ6DKJ4 435 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 INO80CQ6PI98 192 aaPredicted RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 TRIM46Q7Z4K8 759 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 LAPTM4BQ86VI4 370 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 WDR75Q8IWA0 830 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 ZNF595Q8IYB9 648 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 TMEM132CQ8N3T6 1108 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ZCCHC7Q8N3Z6 543 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 FNDC5Q8NAU1 212 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 OR6Y1Q8NGX8 325 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CHTF18Q8WVB6 975 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CKAP2Q8WWK9 683 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 THAP4Q8WY91 577 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 C8orf44Q96CB5 159 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 C19orf60Q96EN9 201 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 PPP3R2Q96LZ3 170 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 MAGEB18Q96M61 343 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 FER1L6-AS2Q96M78 137 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms