RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR51E2Q9H255 320 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 PLCL2Q9UPR0 1127 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 PROM1O43490 865 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 EDNRAP25101 427 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 FADDQ13158 208 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 SLC27A4Q6P1M0 643 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 RETREG3Q86VR2 466 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 DNAJA4Q8WW22 397 aaPredicted RBP18.63■□□□□ 0.57
SUDS3-204ENST00000543473 NELL2Q99435 816 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 NUDT15Q9NV35 164 aa18.63■□□□□ 0.57
SUDS3-204ENST00000543473 A0A1W2PQL4 384 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 A0A1W2PRU2 124 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 CACNB4O00305 520 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 RCBTB2O95199 551 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 RBM34P42696 430 aaKnown RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 CARD16Q5EG05 197 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF676Q8N7Q3 588 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 TMIEQ8NEW7 156 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 OR10H5Q8NGA6 315 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 OR51G2Q8NGK0 314 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 RGMAQ96B86 450 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 C12orf66Q96MD2 445 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 RNF121Q9H920 327 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 DCAF13Q9NV06 445 aaKnown RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 HPF1Q9NWY4 346 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 STOX2Q9P2F5 926 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 CMPK1P30085 196 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 STXBP1P61764 594 aaKnown RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 FPGSQ05932 587 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 MAD2L1BPQ15013 274 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 HMBOX1Q6NT76 420 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 LETMD1Q6P1Q0 360 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 TMIGD1Q6UXZ0 262 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SAMD14Q8IZD0 417 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 COQ8AQ8NI60 647 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 MMP28Q9H239 520 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 TMEM45AQ9NWC5 275 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SH3D21A4FU49 640 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SOBPA7XYQ1 873 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 FAAHO00519 579 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 PFKMP08237 780 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 CTSEP14091 401 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SHMT2P34897 504 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 PCBP2Q15366 365 aaKnown RBP eCLIP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 PAQR7Q86WK9 346 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF280BQ86YH2 543 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 NKD1Q969G9 470 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF514Q96K75 400 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 CCM2Q9BSQ5 444 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 C5orf51A6NDU8 294 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 GRXCR2A6NFK2 248 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 GPR32O75388 356 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 NFATC1O95644 943 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 MT-ND5P03915 603 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SLC35G6P0C7Q6 338 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SYN1P17600 705 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 CCR8P51685 355 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 SP140Q13342 867 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF615Q8N8J6 731 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 LILRB4Q8NHJ6 448 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 GPER1Q99527 375 aa18.62■□□□□ 0.57
SUDS3-204ENST00000543473 C11orf84Q9BUA3 381 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-204ENST00000543473 ALDOCP09972 364 aaKnown RBP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 PRSS56P0CW18 603 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 HTR1BP28222 390 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GATMP50440 423 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GPRC6AQ5T6X5 926 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GTF2IRD2BQ6EKJ0 949 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 SLC25A25Q6KCM7 469 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GTF2IRD2Q86UP8 949 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GPR151Q8TDV0 419 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 ASB15Q8WXK1 588 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 ASB12Q8WXK4 309 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 IGSF8Q969P0 613 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 SPACA7Q96KW9 195 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 SPATA9Q9BWV2 254 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 CDH10Q9Y6N8 788 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GNB5O14775 395 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 PRODHO43272 600 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 MTRF1O75570 445 aaKnown RBP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 WASP42768 502 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 MLLT10P55197 1068 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 APOFQ13790 326 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 DTX3Q8N9I9 347 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 SLC22A17Q8WUG5 538 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 TRPV4Q9HBA0 871 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 C14orf105Q9NVL8 296 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 IL37Q9NZH6 218 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GMPR2Q9P2T1 348 aaKnown RBP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 INSL6Q9Y581 213 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 FUCA1P04066 466 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 DDX6P26196 483 aaKnown RBP eCLIP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 PRDX3P30048 256 aaKnown RBP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GRK6P43250 576 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 MLLT1Q03111 559 aaPredicted RBP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 GPR68Q15743 365 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 LIPJQ5W064 366 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 PM20D1Q6GTS8 502 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 FBXO42Q6P3S6 717 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms