RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 MEOX1P50221 254 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 ST13P50502 369 aaKnown RBP12.24□□□□□ -0.45
RTN3-212ENST00000543123 IRF8Q02556 426 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 STX4Q12846 297 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 RUNX2Q13950 521 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 SERTAD2Q14140 314 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 DOC2AQ14183 400 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 OR4D1Q15615 310 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
RTN3-212ENST00000543123 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
RTN3-212ENST00000543123 TMEM35AQ53FP2 167 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 GRTP1Q5TC63 336 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 ABHD17CQ6PCB6 329 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 CCDC91Q7Z6B0 441 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 TBC1D1Q86TI0 1168 aaPredicted RBP12.24□□□□□ -0.45
RTN3-212ENST00000543123 SPATA6LQ8N4H0 392 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 OR14A16Q8NHC5 309 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 STAG3L4Q8TBR4 150 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 PHF10Q8WUB8 498 aaKnown RBP12.24□□□□□ -0.45
RTN3-212ENST00000543123 NCLNQ969V3 563 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 UBXN10Q96LJ8 280 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 QRFPRQ96P65 431 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 CENPKQ9BS16 269 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 UNKQ9C0B0 810 aaKnown RBP12.24□□□□□ -0.45
RTN3-212ENST00000543123 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 NMRAL1Q9HBL8 299 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 LYRM4Q9HD34 91 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 ERVK-11Q9UQG0 969 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
RTN3-212ENST00000543123 CCDC189A1A4V9 331 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
RTN3-212ENST00000543123 E9PLN8 166 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 TAPBPO15533 448 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 RAD51CO43502 376 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 CTNSO60931 367 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 PIAS1O75925 651 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 TUBB4AP04350 444 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 CERS1P27544 350 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 LIM2P55344 173 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 HSDL2Q6YN16 418 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
RTN3-212ENST00000543123 MORN4Q8NDC4 146 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 AGAP11Q8TF27 550 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 EXT2Q93063 718 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 VKORC1Q9BQB6 163 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 TBCDQ9BTW9 1192 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
RTN3-212ENST00000543123 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
RTN3-212ENST00000543123 ADGRG4Q8IZF6 3080 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 SYCE1LA8MT33 242 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 A8MVJ9 347 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 SUPT3HB4E1H0 165 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ACOT7O00154 380 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 CYR61O00622 381 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 DYRK3O43781 588 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 PEX1O43933 1283 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 KERAO60938 352 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 SUPT3HO75486 399 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 CLDN14O95500 239 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 COX7A2P14406 83 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
RTN3-212ENST00000543123 PTGS2P35354 604 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 CASP2P42575 452 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 MSH2P43246 934 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 PLTPP55058 493 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 CHIT1Q13231 466 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 MED27Q6P2C8 311 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 PAOXQ6QHF9 649 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 CHSY3Q70JA7 882 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 CCDC25Q86WR0 208 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ZNF227Q86WZ6 799 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
RTN3-212ENST00000543123 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ALG9Q9H6U8 611 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 HPF1Q9NWY4 346 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 GRHL1Q9NZI5 618 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 VTI1BQ9UEU0 232 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 ZNF490Q9ULM2 529 aaPredicted RBP12.22□□□□□ -0.45
RTN3-212ENST00000543123 PYCARDQ9ULZ3 195 aa12.22□□□□□ -0.45
RTN3-212ENST00000543123 K7EPI3 171 aa12.21□□□□□ -0.45
RTN3-212ENST00000543123 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
RTN3-212ENST00000543123 PRF1P14222 555 aa12.21□□□□□ -0.45
RTN3-212ENST00000543123 TNNI3P19429 210 aa12.21□□□□□ -0.45
RTN3-212ENST00000543123 HIST1H1TP22492 207 aaPredicted RBP12.21□□□□□ -0.45
RTN3-212ENST00000543123 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms