RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 UGT1A3P35503 534 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A5P35504 534 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 EIF2S3P41091 472 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 NPY2RP49146 381 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 AGTR2P50052 363 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 OR1D5P58170 312 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 FAM3BP58499 235 aaPredicted RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ZFP36L1Q07352 338 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 NFATC2Q13469 925 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 NR1D2Q14995 579 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 OASLQ15646 514 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ZRANB3Q5FWF4 1079 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 GPRC6AQ5T6X5 926 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 LYPLAL1Q5VWZ2 237 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ATG16L1Q676U5 607 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 KCTD11Q693B1 232 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 TMEM71Q6P5X7 295 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 KLHL35Q6PF15 583 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ABRAXAS1Q6UWZ7 409 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 WASH2PQ6VEQ5 465 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF627Q7L945 461 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 TAS2R42Q7RTR8 314 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 BCDIN3DQ7Z5W3 292 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 MRGPRGQ86SM5 289 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 CPOQ8IVL8 374 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 SFRP1Q8N474 314 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF248Q8NDW4 579 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 SIMC1Q8NDZ2 872 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 DDHD1Q8NEL9 900 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 OR4D9Q8NGE8 314 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 SLC37A2Q8TED4 501 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 CXorf40BQ96DE9 158 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ATXN7L3BQ96GX2 97 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 CDKN2AIPNLQ96HQ2 116 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 COPS8Q99627 209 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 CCM2Q9BSQ5 444 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UCK1Q9HA47 277 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A7Q9HAW7 530 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A10Q9HAW8 530 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 UGT1A8Q9HAW9 530 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 POT1Q9NUX5 634 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ARL8BQ9NVJ2 186 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 NLE1Q9NVX2 485 aaPredicted RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 SMOXQ9NWM0 555 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 GAR1Q9NY12 217 aaKnown RBP5.2□□□□□ -1.58
CPSF7-220ENST00000541963 TBC1D29Q9UFV1 150 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ANAPC5Q9UJX4 755 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 ACSL5Q9ULC5 683 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 SATB2Q9UPW6 733 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 DNAJC16Q9Y2G8 782 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 COLEC10Q9Y6Z7 277 aa5.2□□□□□ -1.58
CPSF7-220ENST00000541963 WDR87Q6ZQQ6 2873 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 A0A087WV48 116 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 IGHV1OR21-1A0A087WYE8 117 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 A0A087X1B8 175 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 C17orf113A0A1B0GUU1 675 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 OR2AG2A6NM03 316 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 AGAP14A8MT82 685 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 H7C0S8 307 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 H7C1Q1 480 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 J3KRW8 73 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 TAF4O00268 1085 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 PFDN6O15212 129 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 LDB2O43679 373 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ERLIN1O75477 346 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 AP2A2O94973 939 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 APRTP07741 180 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ATP1B2P14415 290 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CHN1P15882 459 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CD82P27701 267 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CD1CP29017 333 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 RPL22P35268 128 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 NSG1P42857 185 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 GDF5P43026 501 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ABCG1P45844 678 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF140P52738 457 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 LIMK2P53671 638 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 UCNP55089 124 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 BASP1P80723 227 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 XIAPP98170 497 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CDK16Q00536 496 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CACNG1Q06432 222 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 DMPKQ09013 629 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 MSLNQ13421 630 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ALKBH1Q13686 389 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 KRT33BQ14525 404 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 PTPRCAPQ14761 206 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 POU6F1Q14863 301 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ZSCAN26Q16670 478 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 BCL7AQ4VC05 210 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 RUNDC3AQ59EK9 446 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 FNBP1LQ5T0N5 605 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 SUMO4Q6EEV6 95 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CYB5D1Q6P9G0 228 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 WDR74Q6RFH5 385 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CERS6Q6ZMG9 384 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms