RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 BPGMP07738 259 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 HNRNPH1P31943 449 aaKnown RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 SERPINB4P48594 390 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 CCNG1P51959 295 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 SKP1P63208 163 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 MFAP5Q13361 173 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 UBAP2LQ14157 1087 aaKnown RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 NSDHLQ15738 373 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
LTBR-209ENST00000541102 CRB2Q5IJ48 1285 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 TOR1AIP1Q5JTV8 583 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 LIPMQ5VYY2 423 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 IGFL2Q6UWQ7 119 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 FRMD7Q6ZUT3 714 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 ANKRD37Q7Z713 158 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 LAS2Q8IYD9 372 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 OR6Y1Q8NGX8 325 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 PSMF1Q92530 271 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 MTFMTQ96DP5 389 aaKnown RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 IMMP1LQ96LU5 166 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 MAGEB10Q96LZ2 347 aaPredicted RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 KCNA7Q96RP8 456 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 LMF1Q96S06 567 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 TUBB6Q9BUF5 446 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 EFCAB11Q9BUY7 163 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 SLC6A16Q9GZN6 736 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 RHBGQ9H310 441 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 NT5DC2Q9H857 520 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 ZNF395Q9H8N7 513 aaPredicted RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 PRM3Q9NNZ6 103 aa13.39□□□□□ -0.27
LTBR-209ENST00000541102 FARSBQ9NSD9 589 aaKnown RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 COPG1Q9Y678 874 aaKnown RBP13.39□□□□□ -0.27
LTBR-209ENST00000541102 SHANK1Q9Y566 2161 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 A0A1W2PQ72 361 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 URADA6NGE7 173 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 TCP11X1B4DZS4 312 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 TRIM13O60858 407 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 CLDN9O95484 217 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 F10P00742 488 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 FHP07954 510 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 SERPINA6P08185 405 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ITGAMP11215 1152 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 PCNAP12004 261 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ICAM2P13598 275 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 IL10P22301 178 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 FOXA1P55317 472 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ARG2P78540 354 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ACTN3Q08043 901 aaPredicted RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 ESPL1Q14674 2120 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ZRSR2Q15696 482 aaKnown RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 B3GNTL1Q67FW5 361 aaPredicted RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 MILR1Q7Z6M3 343 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 KRT78Q8N1N4 520 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 MGARPQ8TDB4 240 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 PPP4R1Q8TF05 950 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 TSLPQ969D9 159 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ATP6V1E2Q96A05 226 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 TBC1D20Q96BZ9 403 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 ZNF382Q96SR6 550 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 MTERF1Q99551 399 aaKnown RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 STMN4Q9H169 189 aaPredicted RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 LANCL2Q9NS86 450 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 PCDHGA10Q9Y5H3 936 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 PRRC2CQ9Y520 2896 aaKnown RBP13.38□□□□□ -0.27
LTBR-209ENST00000541102 DOPEY2Q9Y3R5 2298 aa13.38□□□□□ -0.27
LTBR-209ENST00000541102 LRRK2Q5S007 2527 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 A0A0G2JN53 185 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 H0YIV9 168 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 TM9SF1O15321 606 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 ZWINTO95229 277 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 ETHE1O95571 254 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 OTCP00480 354 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 CHRNGP07510 517 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 HPDP32754 393 aaPredicted RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 SOX11P35716 441 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 HTR6P50406 440 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 OR4D2P58180 307 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 STXBP1P61764 594 aaKnown RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 BTN3A2P78410 334 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 RHAGQ02094 409 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 MRPL49Q13405 166 aaKnown RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 DDX39BQ13838 428 aaKnown RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 ZNF169Q14929 603 aaPredicted RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 ABRAXAS2Q15018 415 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 TLR1Q15399 786 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 EIF2S3LQ2VIR3 472 aaKnown RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 SFT2D3Q587I9 215 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 SGO1Q5FBB7 561 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 LIPJQ5W064 366 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 NIPAL1Q6NVV3 410 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 MED27Q6P2C8 311 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 RIPOR1Q6ZS17 1223 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 GPRIN3Q6ZVF9 776 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 CDYL2Q8N8U2 506 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms