RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TAS2R50P59544 299 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 DEFA1P59665 94 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 DEFA3P59666 94 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 CDK6Q00534 326 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 NFE2L1Q14494 772 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 GPR33Q49SQ1 333 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 FLYWCH1Q4VC44 716 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 C22orf42Q6IC83 251 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 RETSATQ6NUM9 610 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 SZRD1Q7Z422 152 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 COMMD6Q7Z4G1 85 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 COMTD1Q86VU5 262 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 CADM2Q8N3J6 435 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 ST13P5Q8NFI4 369 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR2AP1Q8NGE2 309 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 DNAJB8Q8NHS0 232 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 CFAP97Q9P2B7 532 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 PLAGL1Q9UM63 463 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 POFUT2Q9Y2G5 429 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 A0A0G2JN53 185 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 MEIOCA2RUB1 952 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 FADS2P1A8MWK0 482 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 GFYI3L273 518 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 AP2A2O94973 939 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 KLK1P06870 262 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 CYP2A7P20853 494 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 UBE3AQ05086 875 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 GCNT6Q5T4J0 391 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR2G6Q5TZ20 316 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 DEF8Q6ZN54 512 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 TPRG1Q6ZUI0 275 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 TCEANCQ8N8B7 351 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR4D11Q8NGI4 311 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 C11orf24Q96F05 449 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 PLCXD1Q9NUJ7 323 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 ITGB1BP2Q9UKP3 347 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 NCR1O76036 304 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLITRK5O94991 958 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 IGSF6O95976 241 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 IMPA1P29218 277 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 HLA-FP30511 346 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 C2orf80Q0P641 193 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 HNRNPA0Q13151 305 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CCDC58Q4VC31 144 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 PLAG1Q6DJT9 500 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 TUBA3EQ6PEY2 450 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM131AQ6UXB0 335 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 B3GLCTQ6Y288 498 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMPRSS11AQ6ZMR5 421 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 PGBD3Q8N328 593 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 ASCC1Q8N9N2 400 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 NLGN4YQ8NFZ3 816 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SCRN2Q96FV2 425 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 IL17FQ96PD4 163 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 TM9SF2Q99805 663 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 WRAP53Q9BUR4 548 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 C11orf54Q9H0W9 315 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 FTSJ1Q9UET6 329 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 KLHL18O94889 574 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 BCHEP06276 602 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 C8GP07360 202 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRPH2P23942 346 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SPINT3P49223 89 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CDC42P60953 191 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 DEFB128Q7Z7B8 93 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 DCLRE1CQ96SD1 692 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 RIOK2Q9BVS4 552 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 POLR2J2Q9GZM3 115 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SUV39H2Q9H5I1 410 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRKAB1Q9Y478 270 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SCN5AQ14524 2016 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC35F4A4IF30 521 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 AGAP14A8MT82 685 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 DVL2O14641 736 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR10H3O60404 316 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CBLP22681 906 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 TIA1P31483 386 aaKnown RBP eCLIP9.89□□□□□ -0.832e-9■□□□□ 10.2
CDC42SE1-207ENST00000540998 CRYBB2P43320 205 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 XCR1P46094 333 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 ALDH9A1P49189 494 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 METAP1P53582 386 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CRISP1P54107 249 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CNTN1Q12860 1018 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 VEPH1Q14D04 833 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM26DQ5JW98 314 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 RNF165Q6ZSG1 346 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 RAD9AQ99638 391 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 SMAD5Q99717 465 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 PIP5K1AQ99755 562 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 TAPBPLQ9BX59 468 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 MIXL1Q9H2W2 232 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 MVB12BQ9H7P6 319 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 C1GALT1Q9NS00 363 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 TVP23BQ9NYZ1 205 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms