RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 HSD17B7P56937 341 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 TMPRSS3P57727 454 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 AP2B1P63010 937 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 OCRLQ01968 901 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 ATP6AP1LQ52LC2 224 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 CCNYL2Q5T2Q4 361 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 FAM199XQ6PEV8 388 aaPredicted RBP16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 CCDC81Q6ZN84 652 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 GPR180Q86V85 440 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 PDSS2Q86YH6 399 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 SAMD14Q8IZD0 417 aaPredicted RBP16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 ZNF781Q8N8C0 355 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 THAP4Q8WY91 577 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 CATSPER2Q96P56 530 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 KCNA7Q96RP8 456 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 SORT1Q99523 831 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 PSME2Q9UL46 239 aa16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 MRPS2Q9Y399 296 aaKnown RBP16.55■□□□□ 0.24
CLSTN3-210ENST00000540931 TEX51A0A1B0GUA7 166 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 ITM2AO43736 263 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 SEC22BO75396 215 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 HEXBP07686 556 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 CCR10P46092 362 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 MAPK12P53778 367 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 LIM2P55344 173 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 SLAMF1Q13291 335 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 HEPACAMQ14CZ8 416 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 NR6A1Q15406 480 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 ADNP2Q6IQ32 1131 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 QSOX2Q6ZRP7 698 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 COX15Q7KZN9 410 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 COMMD6Q7Z4G1 85 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 UBE3DQ7Z6J8 389 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 SPACA3Q8IXA5 215 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 CA13Q8N1Q1 262 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 TANKQ92844 425 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 C19orf60Q96EN9 201 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 ACTL8Q9H568 366 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 LRTM1Q9HBL6 345 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 FIS1Q9Y3D6 152 aa16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 PTRH2Q9Y3E5 179 aaKnown RBP16.54■□□□□ 0.24
CLSTN3-210ENST00000540931 A0A0A6YYD5 115 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 GNG14A0A1W2PPG7 69 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 KLHL41O60662 606 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 KLF7O75840 302 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 MED26O95402 600 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 FAM58BPP0C7Q3 252 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 DRD2P14416 443 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 LIFP15018 202 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 CPN2P22792 545 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 MMP11P24347 488 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 CERS1P27544 350 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 SERPINB3P29508 390 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 EMP2P54851 167 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 IRX1P78414 480 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 TBL3Q12788 808 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 IKBIPQ70UQ0 350 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 METTL27Q8N6F8 245 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 C1orf52Q8N6N3 182 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 PLPP5Q8NEB5 264 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 STARD8Q92502 1023 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 SPSB2Q99619 263 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 CRB3Q9BUF7 120 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 MRPL1Q9BYD6 325 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 AICDAQ9GZX7 198 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 CCDC134Q9H6E4 229 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 SLC22A11Q9NSA0 550 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 WDR70Q9NW82 654 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 HCN3Q9P1Z3 774 aa16.53■□□□□ 0.24
CLSTN3-210ENST00000540931 C1orf226A1L170 272 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 SAP18O00422 153 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 PEX12O00623 359 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 PIP5K1BO14986 540 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 PRMT3O60678 531 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 LYPLA1O75608 230 aaPredicted RBP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 ETHE1O95571 254 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 KLK1P06870 262 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 LINC00032P0C843 101 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 TIA1P31483 386 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 RPL3P39023 403 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 ASMTP46597 345 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 HTR6P50406 440 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 RRADP55042 308 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 KLC1Q07866 573 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 SERTAD2Q14140 314 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 TGIF1Q15583 401 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 UGT8Q16880 541 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 XKR7Q5GH72 579 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 TCHHL1Q5QJ38 904 aaPredicted RBP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 PRSS41Q7RTY9 318 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 AGR3Q8TD06 166 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 STON2Q8WXE9 905 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 PEX11GQ96HA9 241 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 NAF1Q96HR8 494 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 PELOQ9BRX2 385 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 MEAF6Q9HAF1 191 aa16.52■□□□□ 0.24
CLSTN3-210ENST00000540931 MRGBPQ9NV56 204 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms