RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MMABQ96EY8 250 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TEX37Q96LM6 180 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MAPKAP1Q9BPZ7 522 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MYNNQ9NPC7 610 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TEX10Q9NXF1 929 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ARMCX1Q9P291 453 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FBXW2Q9UKT8 454 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ASB4Q9Y574 426 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 B3GALT1Q9Y5Z6 326 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PKD1L2Q7Z442 2459 aa17.9■□□□□ 0.46
TNFRSF1A-213ENST00000540022 KIF26BQ2KJY2 2108 aa17.89■□□□□ 0.46
TNFRSF1A-213ENST00000540022 A0A1B0GX78 115 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DCTN3O75935 186 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CD1EP15812 388 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZNF28P17035 718 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GPX3P22352 226 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 AVPR1BP47901 424 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MRPL19P49406 292 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 RAB15P59190 212 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 STX1BP61266 288 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 UFM1P61960 85 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GABPB1Q06547 395 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SQLEQ14534 574 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C1orf189Q5VU69 101 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PAOXQ6QHF9 649 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 OR9I1Q8NGQ6 314 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PROKR1Q8TCW9 393 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GFM2Q969S9 779 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MVB12AQ96EY5 273 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SLC7A5P2Q9GIP4 190 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TXLNGQ9NUQ3 528 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 KCMF1Q9P0J7 381 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DAPP1Q9UN19 280 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SATB2Q9UPW6 733 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ATG4BQ9Y4P1 393 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MAU2Q9Y6X3 613 aa17.89■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LRATO95237 230 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 IL3P08700 152 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ITGAXP20702 1163 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 OR1D4P47884 311 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LIM2P55344 173 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CLDN8P56748 225 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TRA2BP62995 288 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SKP1P63208 163 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MAT1AQ00266 395 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DCAF12Q5T6F0 453 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FAM71E1Q6IPT2 247 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 NIPAL1Q6NVV3 410 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CEACAM20Q6UY09 585 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MMP21Q8N119 569 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CA13Q8N1Q1 262 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MIER2Q8N344 545 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TMEM132CQ8N3T6 1108 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 KRTCAP2Q8N6L1 136 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FITM2Q8N6M3 262 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CLIP3Q96DZ5 547 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GBP5Q96PP8 586 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LRRC37BQ96QE4 947 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TAAR9Q96RI9 348 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 NPLQ9BXD5 320 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LYARQ9NX58 379 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 HCN3Q9P1Z3 774 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 EXO1Q9UQ84 846 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZFHX4Q86UP3 3567 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DSPP15924 2871 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 A0A1W2PR48 441 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C9JVG2 144 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 H0YIG0 161 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TAF4O00268 1085 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CHST10O43529 356 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 AKAP10O43572 662 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 KIAA0754O94854 1291 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 IL12AP29459 219 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ASMTP46597 345 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 IRX1P78414 480 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MC1RQ01726 317 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 KLF10Q13118 480 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SYT16Q17RD7 645 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PRMT9Q6P2P2 845 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GPR180Q86V85 440 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 EFCAB3Q8N7B9 438 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CCDC106Q9BWC9 280 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DPY30Q9C005 99 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LYRM4Q9HD34 91 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZIM2Q9NZV7 527 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CDC14AQ9UNH5 594 aa17.88■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TRABD2BA6NFA1 517 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PSMD12O00232 456 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PROM1O43490 865 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CPNE3O75131 537 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PRKRAO75569 313 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 HBQ1P09105 142 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GSTM5P46439 218 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZFP36L2P47974 494 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 KLC1Q07866 573 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C2orf80Q0P641 193 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 NDUFAF5Q5TEU4 345 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZNF385CQ66K41 422 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms