RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MANBAO00462 879 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 RAD1O60671 282 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 NR2F6P10588 404 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CD59P13987 128 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 TACR1P25103 407 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CD1CP29017 333 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CSF2RBP32927 897 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 HPCAL1P37235 193 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 DPP6P42658 865 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 GPLD1P80108 840 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 HEPACAMQ14CZ8 416 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 LTB4RQ15722 352 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 RFTN2Q52LD8 501 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 SPANXN4Q5MJ08 99 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 LRIG3Q6UXM1 1119 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 COMMD6Q7Z4G1 85 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 NRROSQ86YC3 692 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 BANPQ8N9N5 519 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 GPBAR1Q8TDU6 330 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 IPCEF1Q8WWN9 437 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 FAM162AQ96A26 154 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 EFHD2Q96C19 240 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 MAPKAP1Q9BPZ7 522 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 IGSF5Q9NSI5 407 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 STMN3Q9NZ72 180 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 VTI1BQ9UEU0 232 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 VDAC3Q9Y277 283 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 C17orf105B2RV13 164 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 BRINP1O60477 761 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 GUCY1B2O75343 617 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CIB2O75838 187 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 UBTFL6P0CB48 400 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 IMPDH1P20839 514 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 IL12BP29460 328 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 KIR3DL1P43629 444 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 HNMTP50135 292 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 AGFG1P52594 562 aaKnown RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 UFM1P61960 85 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CSNK1G2P78368 415 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 SNTA1Q13424 505 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 ST3GAL2Q16842 350 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 MREGQ8N565 214 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 ESX1Q8N693 406 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 COX18Q8N8Q8 333 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 AMER3Q8N944 861 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 STMN2Q93045 179 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 ADOQ96SZ5 270 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 FAM129AQ9BZQ8 928 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 C1orf109Q9NX04 203 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 TEX10Q9NXF1 929 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 OARD1Q9Y530 152 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 FAM166BA8MTA8 275 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 RRP9O43818 475 aaKnown RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 EPN2O95208 641 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 PAPLNO95428 1278 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 ABHD2P08910 425 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 FGF3P11487 239 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 MTPNP58546 118 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 SLC25A3Q00325 362 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 RPA4Q13156 261 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 ZNF678Q5SXM1 525 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 ABRAXAS1Q6UWZ7 409 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CLECL1Q8IZS7 167 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 SMYD1Q8NB12 490 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 FGF11Q92914 225 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 CIDECQ96AQ7 238 aaPredicted RBP6.87□□□□□ -1.31
MSH6-209ENST00000538136 ALG2Q9H553 416 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 PADI2Q9Y2J8 665 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 NDUFAF1Q9Y375 327 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 U3KQV3 271 aa6.87□□□□□ -1.31
MSH6-209ENST00000538136 AGPSO00116 658 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TM9SF1O15321 606 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 C6orf47O95873 294 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 GM2AP17900 193 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 JAK1P23458 1154 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 PTX3P26022 381 aaPredicted RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 DCDC1P59894 354 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 PCLAFQ15004 111 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 UNC5DQ6UXZ4 953 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 NEK10Q6ZWH5 1172 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TCAIMQ8N3R3 496 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 LNX2Q8N448 690 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 PHOSPHO1Q8TCT1 267 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SLC39A7Q92504 469 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 PTCD3Q96EY7 689 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 VPS35Q96QK1 796 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TBL1XR1Q9BZK7 514 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SELENONQ9NZV5 590 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 FOXJ2Q9P0K8 574 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ACAD8Q9UKU7 415 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 MKLN1Q9UL63 735 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 RAP2CQ9Y3L5 183 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 MED13Q9UHV7 2174 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TRBV11-1A0A0K0K1C0 115 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 A0A1W2PRB8 838 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CCDC189A1A4V9 331 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 HMX2A2RU54 273 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 FCHO1O14526 889 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms