RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CLOCKO15516 846 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 TGM6O95932 706 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 C1QAP02745 245 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 PTPN6P29350 595 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 RPA3P35244 121 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 PRSS12P56730 875 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 PLOD1Q02809 727 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 PRDX1Q06830 199 aaKnown RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 LGALS3BPQ08380 585 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 GGTLC2Q14390 218 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 NAA25Q14CX7 972 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 ZNF791Q3KP31 576 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 NHSL2Q5HYW2 709 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 HECTD2Q5U5R9 776 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 ATG4DQ86TL0 474 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 ZNF610Q8N9Z0 462 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 KCTD6Q8NC69 237 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 PPFIBP2Q8ND30 876 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 NUP43Q8NFH3 380 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 FAM168AQ92567 244 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 WNT2BQ93097 391 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 MRPL24Q96A35 216 aaKnown RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 C3orf49Q96BT1 292 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 TM4SF19Q96DZ7 209 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-217ENST00000537162 OLFM3Q96PB7 478 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 ABCF3Q9NUQ8 709 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 ELOVL5Q9NYP7 299 aa8.58□□□□□ -1.04
CPSF7-217ENST00000537162 H7BY64 318 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 LY6HO94772 140 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 FTCDO95954 541 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 CGAP01215 116 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 FTLP02792 175 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 ERGP11308 486 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 JAK1P23458 1154 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 COILP38432 576 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 SSR1P43307 286 aaKnown RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 SLC6A12P48065 614 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 KCNJ5P48544 419 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 CDK9P50750 372 aaKnown RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 DSCR9P59020 149 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 RELAQ04206 551 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 SRYQ05066 204 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 GAB1Q13480 694 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 NRF1Q16656 503 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 SLC22A10Q63ZE4 541 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 PACS1Q6VY07 963 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 DNAJC14Q6Y2X3 702 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 LDB1Q86U70 411 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 GPSM1Q86YR5 675 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 KRT222Q8N1A0 295 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 CNEP1R1Q8N9A8 125 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 PAQR8Q8TEZ7 354 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 PROX1Q92786 737 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 CAVIN3Q969G5 261 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 ABTB1Q969K4 478 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 PRAP1Q96NZ9 151 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 FCRL5Q96RD9 977 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 METTL17Q9H7H0 456 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 ARL15Q9NXU5 204 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 HEY2Q9UBP5 337 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 TSR3Q9UJK0 312 aaKnown RBP8.57□□□□□ -1.04
CPSF7-217ENST00000537162 CLDN16Q9Y5I7 305 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 TENM3Q9P273 2699 aa8.57□□□□□ -1.04
CPSF7-217ENST00000537162 IGHV4-61A0A0C4DH41 118 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 MYOCOSA0A1B0GUC4 107 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 CDC7O00311 574 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 LCMT2O60294 686 aaKnown RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 GALR3O60755 368 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 TRIM3O75382 744 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 HPNP05981 417 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 OR56A5P0C7T3 313 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 APEHP13798 732 aaKnown RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 TBXA2RP21731 343 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 KIR2DL2P43627 348 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 TNNT3P45378 269 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 SIRPAP78324 504 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 MEF2AQ02078 507 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 OCLNQ16625 522 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 ZNF672Q499Z4 452 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 DEFB134Q4QY38 66 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.56□□□□□ -1.04
CPSF7-217ENST00000537162 ALKBH2Q6NS38 261 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 TTC23LQ6PF05 361 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 OPN5Q6U736 354 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 SBSNQ6UWP8 590 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 Q6ZPA2 131 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 AFAP1L2Q8N4X5 818 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 KBTBD8Q8NFY9 601 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 SMPDL3AQ92484 453 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 RNF157Q96PX1 679 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 BTBD9Q96Q07 612 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 UCN2Q96RP3 112 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 SLC39A3Q9BRY0 314 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 FSD1LQ9BXM9 530 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 RHBGQ9H310 441 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 UBQLN3Q9H347 655 aa8.56□□□□□ -1.04
CPSF7-217ENST00000537162 TMEFF2Q9UIK5 374 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms