RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 METTL2AQ96IZ6 378 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SGPP1Q9BX95 441 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CCDC177Q9NQR7 707 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TAC3Q9UHF0 121 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 A0A1W2PPV9 198 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SLC16A6O15403 523 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PORP16435 677 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GSTM2P28161 218 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ELK4P28324 431 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PKLRP30613 574 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 POLR2IP36954 125 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DCTP40126 519 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MAZP56270 477 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MEF2AQ02078 507 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCDH1Q08174 1060 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 IL18R1Q13478 541 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GPR18Q14330 331 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CATSPEREQ5SY80 951 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BMP8AQ7Z5Y6 402 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMPRSS11BQ86T26 416 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SERPINA11Q86U17 422 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 HIPK1Q86Z02 1210 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KLHDC8AQ8IYD2 350 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RNF175Q8N4F7 328 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NETO1Q8TDF5 533 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MTFMTQ96DP5 389 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 AMBRA1Q9C0C7 1298 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ING2Q9H160 280 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SPNS1Q9H2V7 528 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SMOC1Q9H4F8 434 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 C3orf18Q9UK00 162 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PPT2Q9UMR5 302 aa12.36□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RP1P56715 2156 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 INHBBP09529 407 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TFPTP0C1Z6 253 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 JUPP14923 745 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NPPBP16860 134 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PEBP1P30086 187 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CTSKP43235 329 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RAB28P51157 221 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PHEXP78562 749 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CHIT1Q13231 466 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF829Q3KNS6 432 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 C6orf141Q5SZD1 244 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GPR107Q5VW38 600 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PRAMEF13Q5VWM6 474 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LIPJQ5W064 366 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FRG2Q64ET8 278 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 XAF1Q6GPH4 301 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CAPN13Q6MZZ7 669 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMEM26Q6ZUK4 368 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZBTB44Q8NCP5 570 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CHDHQ8NE62 594 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR2I1PQ8NGU4 316 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CLHC1Q8NHS4 586 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZDHHC1Q8WTX9 485 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 THAP11Q96EK4 314 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MAGED4Q96JG8 741 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FRG2BQ96QU4 278 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 INPP5KQ9BT40 448 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GABARAPL1Q9H0R8 117 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KIR3DX1Q9H7L2 352 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SMURF2Q9HAU4 748 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CUEDC1Q9NWM3 386 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZSCAN32Q9NX65 697 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SPHK1Q9NYA1 384 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 UTS2RQ9UKP6 389 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCDHGA8Q9Y5G5 932 aa12.35□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GNGT2O14610 69 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 YY2O15391 372 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 AQP9O43315 295 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PIAS2O75928 621 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DNAJB5O75953 348 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SERPINA1P01009 418 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CFIP05156 583 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF12P17014 697 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PRPS1L1P21108 318 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TACR1P25103 407 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RYKP34925 604 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 YAP1P46937 504 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 IST1P53990 364 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 UBE2IP63279 158 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SRSF11Q05519 484 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BNIP3Q12983 259 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CSTF3Q12996 717 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DOC2AQ14183 400 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SIM2Q14190 667 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SHBQ15464 509 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 XKR6Q5GH73 641 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 DNAJC14Q6Y2X3 702 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TRIM48Q8IWZ4 208 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 C10orf111Q8N326 155 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 APIPQ96GX9 242 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms