RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SLC7A1P30825 629 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 OPRL1P41146 370 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PRIM2P49643 509 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PNLIPRP1P54315 467 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 TAS2R50P59544 299 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 RHDQ02161 417 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 LAPTM5Q13571 262 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 COLEC12Q5KU26 742 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 NANOGP8Q6NSW7 305 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 TMIGD1Q6UXZ0 262 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 RNF111Q6ZNA4 994 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF438Q7Z4V0 828 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 WDR53Q7Z5U6 358 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 UBE2J2Q8N2K1 259 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ATOH1Q92858 354 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ISL2Q96A47 359 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ITPKCQ96DU7 683 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 MTERF3Q96E29 417 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 KLHDC7BQ96G42 594 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PPP3R2Q96LZ3 170 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 COQ10AQ96MF6 247 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 NUAK2Q9H093 628 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 RPF2Q9H7B2 306 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ANKRA2Q9H9E1 313 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 RAD18Q9NS91 495 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 EHD3Q9NZN3 535 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 VPS29Q9UBQ0 182 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PTBP2Q9UKA9 531 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 NUAK1O60285 661 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 BMP10O95393 424 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 IL7RP16871 459 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ELK4P28324 431 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PRLHRP49683 370 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ERVK-8P63133 956 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ZXDCQ2QGD7 858 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PLEKHS1Q5SXH7 462 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 FAM92BQ6ZTR7 304 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 OLIG3Q7RTU3 272 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 DEPDC4Q8N2C3 294 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 OR7G3Q8NG95 312 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 L3HYPDHQ96EM0 354 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 AHCYL2Q96HN2 611 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ASB2Q96Q27 587 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 TP63Q9H3D4 680 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 NEK6Q9HC98 313 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 SMOXQ9NWM0 555 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 HRASLS2Q9NWW9 162 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 SPHK1Q9NYA1 384 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ERGIC3Q9Y282 383 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ZFC3H1O60293 1989 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PRSS38A1L453 326 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 FAM221BA6H8Z2 402 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 EIF3FO00303 357 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 AQP9O43315 295 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PCDH7O60245 1069 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 FAM20BO75063 409 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 CD9P21926 228 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 AZGP1P25311 298 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 CAPGP40121 348 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 EMP3P54852 163 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 MAZP56270 477 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 TAP2Q03519 686 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 LIPEQ05469 1076 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 MLF2Q15773 248 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 DEPDC1Q5TB30 811 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 TNFAIP8L2Q6P589 184 aaPredicted RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 LARP4Q71RC2 724 aaKnown RBP eCLIP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 CEP68Q76N32 757 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 DTWD1Q8N5C7 304 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 WDR48Q8TAF3 677 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 FAM110BQ8TC76 370 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 MAL2Q969L2 176 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ARSGQ96EG1 525 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 OR2M4Q96R27 311 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 OR4K3Q96R72 315 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 LYSMD1Q96S90 227 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF382Q96SR6 550 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 INPP5KQ9BT40 448 aa7.88□□□□□ -1.15
ABCA4-207ENST00000536513 MRPS30Q9NP92 439 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 APOBEC3BQ9UH17 382 aaKnown RBP7.88□□□□□ -1.15
ABCA4-207ENST00000536513 PRORSD1PA6NEY8 169 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 QSOX1O00391 747 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 SOCS2O14508 198 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 STX16O14662 325 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 MTRF1O75570 445 aaKnown RBP7.87□□□□□ -1.15
ABCA4-207ENST00000536513 ETHE1O95571 254 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 C1QCP02747 245 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 HNRNPA2B1P22626 353 aaKnown RBP7.87□□□□□ -1.15
ABCA4-207ENST00000536513 PRDX6P30041 224 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 FEN1P39748 380 aaKnown RBP7.87□□□□□ -1.15
ABCA4-207ENST00000536513 SLC26A3P40879 764 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 DPP6P42658 865 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 PFN3P60673 137 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 RUNX1T1Q06455 604 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 DEFB134Q4QY38 66 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 TMEM236Q5W0B7 351 aa7.87□□□□□ -1.15
ABCA4-207ENST00000536513 TTC23Q5W5X9 447 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms