RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 CAB39LQ9H9S4 337 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 TIMMDC1Q9NPL8 285 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 PNO1Q9NRX1 252 aaKnown RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 YARS2Q9Y2Z4 477 aaKnown RBP12.25□□□□□ -0.45
RTN3-207ENST00000536011 CLCA3PQ9Y6N3 262 aa12.25□□□□□ -0.45
RTN3-207ENST00000536011 A0A0G2JN53 185 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 FAM159BA6NKW6 160 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 CCNT2O60583 730 aaKnown RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 ITGA10O75578 1167 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 IFNA16P05015 189 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 CRABP2P29373 138 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 MEOX1P50221 254 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 ST13P50502 369 aaKnown RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 IRF8Q02556 426 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 STX4Q12846 297 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 RUNX2Q13950 521 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 SERTAD2Q14140 314 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 DOC2AQ14183 400 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 OR4D1Q15615 310 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 TMEM35AQ53FP2 167 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 GRTP1Q5TC63 336 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 ABHD17CQ6PCB6 329 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 CCDC91Q7Z6B0 441 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 TBC1D1Q86TI0 1168 aaPredicted RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 SPATA6LQ8N4H0 392 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 OR14A16Q8NHC5 309 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 STAG3L4Q8TBR4 150 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 PHF10Q8WUB8 498 aaKnown RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 NCLNQ969V3 563 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 UBXN10Q96LJ8 280 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 QRFPRQ96P65 431 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 CENPKQ9BS16 269 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 KRTAP3-2Q9BYR7 98 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 UNKQ9C0B0 810 aaKnown RBP12.24□□□□□ -0.45
RTN3-207ENST00000536011 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 NMRAL1Q9HBL8 299 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 LYRM4Q9HD34 91 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 ERVK-11Q9UQG0 969 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
RTN3-207ENST00000536011 CCDC189A1A4V9 331 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
RTN3-207ENST00000536011 E9PLN8 166 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 TAPBPO15533 448 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 RAD51CO43502 376 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 CTNSO60931 367 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 PIAS1O75925 651 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 TUBB4AP04350 444 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
RTN3-207ENST00000536011 CERS1P27544 350 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 LIM2P55344 173 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 HSDL2Q6YN16 418 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
RTN3-207ENST00000536011 MORN4Q8NDC4 146 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 AGAP11Q8TF27 550 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 EXT2Q93063 718 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 VKORC1Q9BQB6 163 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 TBCDQ9BTW9 1192 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
RTN3-207ENST00000536011 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
RTN3-207ENST00000536011 ADGRG4Q8IZF6 3080 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 SYCE1LA8MT33 242 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 A8MVJ9 347 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 SUPT3HB4E1H0 165 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ACOT7O00154 380 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 CYR61O00622 381 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 DYRK3O43781 588 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 PEX1O43933 1283 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 KERAO60938 352 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 SUPT3HO75486 399 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 CLDN14O95500 239 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 COX7A2P14406 83 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
RTN3-207ENST00000536011 PTGS2P35354 604 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 CASP2P42575 452 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 MSH2P43246 934 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 PLTPP55058 493 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 CHIT1Q13231 466 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 MED27Q6P2C8 311 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 PAOXQ6QHF9 649 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 CHSY3Q70JA7 882 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 CCDC25Q86WR0 208 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ZNF227Q86WZ6 799 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
RTN3-207ENST00000536011 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ALG9Q9H6U8 611 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms