RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CFAP36Q96G28 342 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FAM173AQ9BQD7 235 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ZDHHC11Q9H8X9 412 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SACM1LQ9NTJ5 587 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ALKBH4Q9NXW9 302 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MYOTQ9UBF9 498 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 COPS7AQ9UBW8 275 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 VWA7Q9Y334 891 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SPACA6W5XKT8 324 aa12.05□□□□□ -0.48
TNFRSF1A-207ENST00000535958 C4orf51C9J302 202 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 G3V3Y1 287 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 WDR1O75083 606 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SMIM10L1P0DMW3 83 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 GABRB3P28472 473 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PPP2R1BP30154 601 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PEX19P40855 299 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MAGEA5P43359 124 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FNTAP49354 379 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 GPR143P51810 404 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PLA2G16P53816 162 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 IST1P53990 364 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 EMC4Q5J8M3 183 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 RNASEH2BQ5TBB1 312 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SBSNQ6UWP8 590 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ADAMTSL2Q86TH1 951 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SARAFQ96BY9 339 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 RMND5BQ96G75 393 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 POM121Q96HA1 1249 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SMIM10Q96HG1 83 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 RASL10BQ96S79 203 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 TTYH2Q9BSA4 534 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 CAPS2Q9BXY5 557 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 POLDIP3Q9BY77 421 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 OR8D2Q9GZM6 311 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 REXO4Q9GZR2 422 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 LIN28AQ9H9Z2 209 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 DEPPQ9NTK1 212 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SLC17A6Q9P2U8 582 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ZNF223Q9UK11 482 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PPIEQ9UNP9 301 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 HRH3Q9Y5N1 445 aa12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PHF3Q92576 2039 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ATP6AP2A0A1C7CYW4 349 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PINLYPA6NC86 204 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 CLGNO14967 610 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 DYRK3O43781 588 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PRKNO60260 465 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 BANF1O75531 89 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ATP6AP2O75787 350 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 C1GALT1C1LP0DN25 315 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 COX7A2P14406 83 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ZNF37AP17032 561 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 CNR1P21554 472 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 DNASE1P24855 282 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MTTPP55157 894 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 RUNX2Q13950 521 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 EFTUD2Q15029 972 aaKnown RBP eCLIP12.03□□□□□ -0.489e-7■■■■■ 38
TNFRSF1A-207ENST00000535958 CYP1B1Q16678 543 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PPP1R3AQ16821 1122 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ZNF750Q32MQ0 723 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SLC25A35Q3KQZ1 300 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FBXW10Q5XX13 1052 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 OPN5Q6U736 354 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 C16orf47Q6ZP98 133 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ZZZ3Q8IYH5 903 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PDIK1LQ8N165 341 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 RASGEF1CQ8N431 466 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 GOLM1Q8NBJ4 401 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MORN4Q8NDC4 146 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 OR2L5Q8NG80 312 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 GOT1L1Q8NHS2 421 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 NRGNQ92686 78 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MS4A6EQ96DS6 147 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PDLIM5Q96HC4 596 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 VPS39Q96JC1 886 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SGCZQ96LD1 299 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 RUNDC3BQ96NL0 473 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SERINC2Q96SA4 455 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FOXC2Q99958 501 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 CTNNAL1Q9UBT7 734 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 B4GALT7Q9UBV7 327 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 OARD1Q9Y530 152 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 LIPGQ9Y5X9 500 aa12.03□□□□□ -0.48
TNFRSF1A-207ENST00000535958 A0A0G2JMM0 328 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 A0A1W2PPB8 328 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 A0A1W2PRS3 328 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FAM221AA4D161 298 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CTAGE15A4D2H0 777 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LRIT2A6NDA9 550 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KIR3DP1A8MWS1 328 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 C17orf105B2RV13 164 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CDC7O00311 574 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 AQP7O14520 342 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DNALI1O14645 258 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CLEC3AO75596 197 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms