RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 EPHA2P29317 976 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 CHI3L1P36222 383 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 SLC35A2P78381 396 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 DMPKQ09013 629 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 SPCS2Q15005 226 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 ATAT1Q5SQI0 421 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 ZNF776Q68DI1 518 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 PLD3Q8IV08 490 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 OR14C36Q8NHC7 312 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 NFKBIDQ8NI38 313 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 GIPC3Q8TF64 312 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 TM4SF18Q96CE8 201 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 APOL4Q9BPW4 351 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 C1QTNF2Q9BXJ5 285 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 XKR8Q9H6D3 395 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 REEP1Q9H902 201 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 AHSPQ9NZD4 102 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 SPATA7Q9P0W8 599 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 NDRG4Q9ULP0 352 aaKnown RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 PADI2Q9Y2J8 665 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 GMPPBQ9Y5P6 360 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 GOLGA4Q13439 2230 aaKnown RBP12.75□□□□□ -0.37
VPS33B-202ENST00000535906 A0A1W2PQU0 124 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 DPM1O60762 260 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 CEACAM5P06731 702 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 CXCR2P25025 360 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 FMO3P31513 532 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 SOAT1P35610 550 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 PRIM2P49643 509 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 MAPK12P53778 367 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 RPS21P63220 83 aaKnown RBP12.75□□□□□ -0.37
VPS33B-202ENST00000535906 REEP5Q00765 189 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 EEF1A2Q05639 463 aaKnown RBP12.75□□□□□ -0.37
VPS33B-202ENST00000535906 FADDQ13158 208 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 SGCGQ13326 291 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 SCARB2Q14108 478 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 CLCA4Q14CN2 919 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 CTF1Q16619 201 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 GCNT6Q5T4J0 391 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 C16orf87Q6PH81 154 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 TTC29Q8NA56 475 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-202ENST00000535906 SPPL2AQ8TCT8 520 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 MRPL38Q96DV4 380 aaKnown RBP12.75□□□□□ -0.37
VPS33B-202ENST00000535906 BCL7BQ9BQE9 202 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 SLC17A9Q9BYT1 436 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 PCBD2Q9H0N5 130 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 TMEM38AQ9H6F2 299 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 FZD3Q9NPG1 666 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 IMP3Q9NV31 184 aaKnown RBP12.75□□□□□ -0.37
VPS33B-202ENST00000535906 AASSQ9UDR5 926 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 ICKQ9UPZ9 632 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 AP1M2Q9Y6Q5 423 aa12.75□□□□□ -0.37
VPS33B-202ENST00000535906 IGKV1-8A0A0C4DH67 115 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 SCAMP1O15126 338 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 OR1F1O43749 312 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 SEMA3DO95025 777 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 ZBTB11O95625 1053 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-202ENST00000535906 DDCP20711 480 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TEAD1P28347 426 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
VPS33B-202ENST00000535906 RRM2P31350 389 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 OR1E2P47887 323 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 MLLT10P55197 1068 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 NPTX1Q15818 432 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TMEM196Q5HYL7 178 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TRIM40Q6P9F5 258 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TSPYL5Q86VY4 417 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-202ENST00000535906 SLC15A4Q8N697 577 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TAMM41Q96BW9 452 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 CAMK1GQ96NX5 476 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 CXorf36Q9H7Y0 433 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 KRT84Q9NSB2 600 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TMEM184CQ9NVA4 438 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 SCN3BQ9NY72 215 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 NDUFAF4Q9P032 175 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 C5AR2Q9P296 337 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 KIF17Q9P2E2 1029 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 SNX8Q9Y5X2 465 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 PRAMEF33A0A0G2JMD5 474 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 PRAMEF25A6NGN4 478 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 OR52A4PA6NMU1 304 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 PLRG1O43660 514 aaKnown RBP12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TFPTP0C1Z6 253 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 ACVR2AP27037 513 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 IGFALSP35858 605 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 TNFRSF4P43489 277 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 ALDH9A1P49189 494 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 CSNK1G2P78368 415 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 RBBP4Q09028 425 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 CYP27C1Q4G0S4 372 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 KIAA1614Q5VZ46 1190 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 LAIR1Q6GTX8 287 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 FAHD1Q6P587 224 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 ZBTB46Q86UZ6 589 aa12.74□□□□□ -0.37
VPS33B-202ENST00000535906 FAM124AQ86V42 546 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms