RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 EXOC3L1Q86VI1 746 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 TMEM52Q8NDY8 209 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 ADAMTS18Q8TE60 1221 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 AGAP11Q8TF27 550 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 CSF3RQ99062 836 aa21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 WDR77Q9BQA1 342 aaPredicted RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 C19orf25Q9UFG5 118 aaPredicted RBP21.37■■□□□ 1.01
SFSWAP-204ENST00000535399 IGKV3D-11A0A0A0MRZ8 115 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 NSG1A0A0A6YYJ2 146 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 IGHV3-20A0A0C4DH32 117 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 EIF4E1BA6NMX2 242 aaKnown RBP21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 MANBAO00462 879 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 CTIFO43310 598 aaKnown RBP21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 PRMT3O60678 531 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 SEMA3DO95025 777 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 ESRRBO95718 433 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 PDYNP01213 254 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 ALDH3A1P30838 453 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 BSGP35613 385 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 HNRNPFP52597 415 aaKnown RBP21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 RAPSNQ13702 412 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 MYBPC3Q14896 1274 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 CFAP157Q5JU67 520 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 SCUBE1Q8IWY4 988 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 PARP9Q8IXQ6 854 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 ZCCHC7Q8N3Z6 543 aaKnown RBP21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF843Q8N446 348 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 FAM47BQ8NA70 645 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 SELENOMQ8WWX9 145 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 PGM2Q96G03 612 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 IMMP1LQ96LU5 166 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 PTCHD1Q96NR3 888 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 MAPKAP1Q9BPZ7 522 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 NECTIN3Q9NQS3 549 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 PRDM9Q9NQV7 894 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 RIC8BQ9NVN3 520 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 GPR83Q9NYM4 423 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 MMACHCQ9Y4U1 282 aa21.36■■□□□ 1.01
SFSWAP-204ENST00000535399 TRIM13O60858 407 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 EEDO75530 441 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 ENO1P06733 434 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 MAOAP21397 527 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 ITGA3P26006 1051 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 SLAMF1Q13291 335 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 AMER2Q8N7J2 671 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 METTL6Q8TCB7 284 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 SMAD5Q99717 465 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 GATA5Q9BWX5 397 aaPredicted RBP21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 CENPHQ9H3R5 247 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF552Q9H707 407 aaPredicted RBP21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 DDX31Q9H8H2 851 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 MID1IP1Q9NPA3 183 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 CLDN16Q9Y5I7 305 aa21.35■■□□□ 1.01
SFSWAP-204ENST00000535399 CFAP46Q8IYW2 2715 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 A0A0A6YYD5 115 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 SEC24DO94855 1032 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 KRT6AP02538 564 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 KRT6BP04259 564 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 ETV4P43268 484 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 KRT6CP48668 564 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 HTR6P50406 440 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 PGDP52209 483 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 NFATC3Q12968 1075 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 RCN2Q14257 317 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 SFT2D3Q587I9 215 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 VWA5B1Q5TIE3 1220 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 MRM1Q6IN84 353 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 ASB18Q6ZVZ8 466 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF595Q8IYB9 648 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 KCNA7Q96RP8 456 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 HBEGFQ99075 208 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 TUBB6Q9BUF5 446 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 MECRQ9BV79 373 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 BRF2Q9HAW0 419 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 SSU72Q9NP77 194 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 TNFRSF12AQ9NP84 129 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 PRTFDC1Q9NRG1 225 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 G3BP2Q9UN86 482 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 COL6A6A6NMZ7 2263 aa21.34■■□□□ 1.01
SFSWAP-204ENST00000535399 TCRBV16S1A1N1A0A5B0 115 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 TGFBR3LH3BV60 316 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 TMPRSS11DO60235 418 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 SERPINA7P05543 415 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 CELA2AP08217 269 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 HMOX2P30519 316 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 FOXA1P55317 472 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 OR4D2P58180 307 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 KBTBD2Q8IY47 623 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 THOC3Q96J01 351 aaKnown RBP21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 MRPL1Q9BYD6 325 aaKnown RBP21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 LHPPQ9H008 270 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 FBXW2Q9UKT8 454 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 SLC12A4Q9UP95 1085 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 MRPS33Q9Y291 106 aaKnown RBP21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 ZNF451Q9Y4E5 1061 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 TIMM22Q9Y584 194 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 PCDHGB7Q9Y5F8 929 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 ACTL7BQ9Y614 415 aa21.33■■□□□ 1.01
SFSWAP-204ENST00000535399 H3BQF6 201 aa21.32■■□□□ 1
SFSWAP-204ENST00000535399 CLDN4O14493 209 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms