RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ACSL4O60488 711 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 PRDM1O75626 825 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 FAM200BP0CF97 657 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 ANPEPP15144 967 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SRD5A2P31213 254 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 TIA1P31483 386 aaKnown RBP eCLIP3.91□□□□□ -1.78
PRKDC-205ENST00000535375 GP5P40197 560 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 BACE1P56817 501 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 FOLH1Q04609 750 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 BFSP1Q12934 665 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 CEACAM7Q14002 265 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 FASTKQ14296 549 aaKnown RBP3.91□□□□□ -1.78
PRKDC-205ENST00000535375 POM121L1PQ3SYA9 428 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 ZNF770Q6IQ21 691 aaPredicted RBP3.91□□□□□ -1.78
PRKDC-205ENST00000535375 TRAT1Q6PIZ9 186 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 PET117Q6UWS5 81 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 HIPK1Q86Z02 1210 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SMYD1Q8NB12 490 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SLC35C1Q96A29 364 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 BPIFA2Q96DR5 249 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SGF29Q96ES7 293 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SERAC1Q96JX3 654 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SPATA17Q96L03 361 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 PRMT1Q99873 361 aaKnown RBP3.91□□□□□ -1.78
PRKDC-205ENST00000535375 ZWILCHQ9H900 591 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 VIPAS39Q9H9C1 493 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 ITGA11Q9UKX5 1188 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 NIP7Q9Y221 180 aaKnown RBP eCLIP3.91□□□□□ -1.78
PRKDC-205ENST00000535375 SH3GLB1Q9Y371 365 aa3.91□□□□□ -1.78
PRKDC-205ENST00000535375 BCLAF3A2AJT9 711 aaKnown RBP3.9□□□□□ -1.79
PRKDC-205ENST00000535375 CCDC162PA2VCL2 907 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 KBTBD13C9JR72 458 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 SELENOFO60613 162 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 SLC1A6P48664 564 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 ITPK1Q13572 414 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 OLFML2AQ68BL7 652 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 FAM47EQ6ZV65 393 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 KLHL7Q8IXQ5 586 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 RNF149Q8NC42 400 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 CD99L2Q8TCZ2 262 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 LIPHQ8WWY8 451 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 SEPT8Q92599 483 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 DNASE1L2Q92874 299 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 ERO1AQ96HE7 468 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 RUNDC3BQ96NL0 473 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 LSG1Q9H089 658 aaKnown RBP3.9□□□□□ -1.79
PRKDC-205ENST00000535375 CPQQ9Y646 472 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 SALL1Q9NSC2 1324 aa3.9□□□□□ -1.79
PRKDC-205ENST00000535375 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 LOC390937A0A1W2PQ73 354 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 YDJCA8MPS7 323 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ANHXE9PGG2 379 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 H0Y626 953 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 SLC7A4O43246 635 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 CLN5O75503 358 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 SIX3O95343 332 aaPredicted RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 LYNP07948 512 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ZFYP08048 801 aaPredicted RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 MUTP22033 750 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 MATKP42679 507 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 OR3A1P47881 315 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 SCN1BQ07699 218 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 RUNX3Q13761 415 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 RNF212Q495C1 297 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ATAD3CQ5T2N8 411 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 PLPP4Q5VZY2 271 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 CAVIN1Q6NZI2 390 aaKnown RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ALKBH5Q6P6C2 394 aaKnown RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 TDHQ8IZJ6 230 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 KIAA0895Q8NCT3 520 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 UBE2Q2Q8WVN8 375 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 UBLCP1Q8WVY7 318 aaPredicted RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ITLN1Q8WWA0 313 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 RCHY1Q96PM5 261 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 APOL2Q9BQE5 337 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ATG101Q9BSB4 218 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 IDI2Q9BXS1 227 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 S100A14Q9HCY8 104 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 CUTCQ9NTM9 273 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 ABCD2Q9UBJ2 740 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 MRPL11Q9Y3B7 192 aaKnown RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 HBS1LQ9Y450 684 aaKnown RBP3.89□□□□□ -1.79
PRKDC-205ENST00000535375 POMT1Q9Y6A1 747 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 PFASO15067 1338 aa3.89□□□□□ -1.79
PRKDC-205ENST00000535375 TRBV5-4A0A0C4DH59 114 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 M0R296 226 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 B4GAT1O43505 415 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 IGHG1P01857 330 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 THY1P04216 161 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 KLK2P20151 261 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 ACKR3P25106 362 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 RPS27AP62979 156 aaKnown RBP3.88□□□□□ -1.79
PRKDC-205ENST00000535375 CYLC2Q14093 348 aaPredicted RBP3.88□□□□□ -1.79
PRKDC-205ENST00000535375 NHLRC3Q5JS37 347 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 ZNF776Q68DI1 518 aaPredicted RBP3.88□□□□□ -1.79
PRKDC-205ENST00000535375 PM20D1Q6GTS8 502 aa3.88□□□□□ -1.79
PRKDC-205ENST00000535375 SHQ1Q6PI26 577 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms