RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GIPC3Q8TF64 312 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TM4SF19Q96DZ7 209 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 CCDC74BQ96LY2 380 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF285Q96NJ3 590 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TMEM74Q96NL1 305 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ELOVL6Q9H5J4 265 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 SYNDIG1Q9H7V2 258 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 COQ10BQ9H8M1 238 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PFDN4Q9NQP4 134 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 FEZF1A0PJY2 475 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 TMX2-CTNND1H3BSU7 103 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 SRPX2O60687 465 aaPredicted RBP11.71□□□□□ -0.54
SCARB1-204ENST00000535005 CLEC3AO75596 197 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 HSD3B1P14060 373 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 SDHBP21912 280 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 HSD3B2P26439 372 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 DCKP27707 260 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 HTR6P50406 440 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 NME5P56597 212 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 PSME3P61289 254 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 SQLEQ14534 574 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 C16orf72Q14CZ0 275 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 CCDC92Q53HC0 331 aaPredicted RBP11.71□□□□□ -0.54
SCARB1-204ENST00000535005 SNAP47Q5SQN1 464 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 TMTC4Q5T4D3 741 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 VN1R5Q7Z5H4 357 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 MCATQ8IVS2 390 aaKnown RBP11.71□□□□□ -0.54
SCARB1-204ENST00000535005 CACTIN-AS1Q8N1I8 211 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 TRPV3Q8NET8 790 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 HUS1BQ8NHY5 278 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 AGR3Q8TD06 166 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 CREB3L4Q8TEY5 395 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 TWIST2Q8WVJ9 160 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 TFAP2CQ92754 450 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 TUBB1Q9H4B7 451 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 BRF2Q9HAW0 419 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 GIN1Q9NXP7 522 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 PLCL2Q9UPR0 1127 aa11.71□□□□□ -0.54
SCARB1-204ENST00000535005 ANKDD1BA6NHY2 528 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 A8MU76 341 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 NPIPB8E9PQR5 432 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 NOL3O60936 208 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 PDYNP01213 254 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ARL4DP49703 201 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ENTPD1P49961 510 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 NEK2P51955 445 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 PDX1P52945 283 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 KCNC4Q03721 635 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CSTF3Q12996 717 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 PWP1Q13610 501 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ABRAXAS2Q15018 415 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 MOGQ16653 247 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 NHSL2Q5HYW2 709 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 MANEAQ5SRI9 462 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 C1QTNF12Q5T7M4 302 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 IL23RQ5VWK5 629 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 NIPAL1Q6NVV3 410 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CHSY3Q70JA7 882 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 VN1R4Q7Z5H5 301 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CHPT1Q8WUD6 406 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SNRNP27Q8WVK2 155 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SELENOMQ8WWX9 145 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SYNPO2LQ9H987 977 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 DMRT3Q9NQL9 472 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 FARSBQ9NSD9 589 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SOHLH2Q9NX45 425 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CDV3Q9UKY7 258 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 COL27A1Q8IZC6 1860 aaPredicted RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 H0YGG7 62 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SLC28A1O00337 649 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CFLARO15519 480 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 E2F6O75461 281 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SERPINB7O75635 380 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 TBX6O95947 436 aaPredicted RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 EIF2S1P05198 315 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 FTH1P19P0C7X4 201 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 PCNAP12004 261 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SEPHS1P49903 392 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ATP4BP51164 291 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ARF3P61204 181 aaPredicted RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 XKR7Q5GH72 579 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 FAM219BQ5XKK7 198 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 FRMPD2BQ6IN97 320 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ADNP2Q6IQ32 1131 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 PRMT9Q6P2P2 845 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ERMP1Q7Z2K6 904 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 B3GNT8Q7Z7M8 397 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 ASPGQ86U10 573 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CLVS1Q8IUQ0 354 aaPredicted RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CAMKVQ8NCB2 501 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 NT5CQ8TCD5 201 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 C12orf43Q96C57 262 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 FCRL4Q96PJ5 515 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 MS4A8Q9BY19 250 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 SIDT1Q9NXL6 827 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 FIS1Q9Y3D6 152 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms