RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 RHBGQ9H310 441 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 ANKRD10Q9NXR5 420 aa9.4□□□□□ -0.9
CLSTN3-203ENST00000534830 INTS1Q8N201 2190 aaKnown RBP9.4□□□□□ -0.91
CLSTN3-203ENST00000534830 AKAP6Q13023 2319 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 CYR61O00622 381 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 STK16O75716 305 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 CD46P15529 392 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 STMN1P16949 149 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 GMPRP36959 345 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 HSPA7P48741 367 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 HNRNPFP52597 415 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 SLC12A2P55011 1212 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 RAB38P57729 211 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 TAS2R50P59544 299 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 RAB10P61026 200 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 TERF2Q15554 542 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 TRADDQ15628 312 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 TBCCQ15814 346 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 KRTCAP3Q53RY4 240 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 FBXO48Q5FWF7 155 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ADNP2Q6IQ32 1131 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 SLC25A25Q6KCM7 469 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ABHD17CQ6PCB6 329 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ZDHHC24Q6UX98 284 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 NCCRP1Q6ZVX7 275 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ISCA2Q86U28 154 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 GPSM1Q86YR5 675 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 CHERPQ8IWX8 916 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 KRT78Q8N1N4 520 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 TMEM178AQ8NBL3 297 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 OR2L5Q8NG80 312 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 FBXO25Q8TCJ0 367 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ESAMQ96AP7 390 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 PTCD3Q96EY7 689 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 GPR137Q96N19 417 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ATOH8Q96SQ7 321 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 MDFIQ99750 246 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 FOXC2Q99958 501 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 REXO4Q9GZR2 422 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 PRDM7Q9NQW5 492 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 KLHL1Q9NR64 748 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 DNAJC11Q9NVH1 559 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 LRFN1Q9P244 771 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF223Q9UK11 482 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 MEMO1Q9Y316 297 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ASB1Q9Y576 335 aa9.39□□□□□ -0.91
CLSTN3-203ENST00000534830 ANKDD1BA6NHY2 528 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 PSMD12O00232 456 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CLGNO14967 610 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 ERI3O43414 337 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 NME2P1O60361 137 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 SLC35E2BP0CK96 405 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 NME2P22392 152 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 EEF1DP29692 281 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 SPRP35270 261 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 MAGEA4P43358 317 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 PLTPP55058 493 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 LIM2P55344 173 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 HSD17B7P56937 341 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 ETF1P62495 437 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CAV1Q03135 178 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 DOC2AQ14183 400 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 RNFT1Q5M7Z0 435 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 GALNTL5Q7Z4T8 443 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 UBE3DQ7Z6J8 389 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF595Q8IYB9 648 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 HORMAD2Q8N7B1 307 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 B3GNT7Q8NFL0 401 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 FBF1Q8TES7 1133 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CA5BP1Q8WTZ4 195 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 ANP32BQ92688 251 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 FAR2Q96K12 515 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 SERINC2Q96SA4 455 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CD244Q9BZW8 370 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CNOT10Q9H9A5 744 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 CCM2LQ9NUG4 571 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 WWOXQ9NZC7 414 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 KCMF1Q9P0J7 381 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 TNFRSF10DQ9UBN6 386 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 DAPP1Q9UN19 280 aa9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 UTP11Q9Y3A2 253 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLSTN3-203ENST00000534830 A0A0G2JN53 185 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 HMX2A2RU54 273 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 SYNDIG1LA6NDD5 238 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 A8MUA0 341 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 B3GALT2O43825 422 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 PRKNO60260 465 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 SLC25A12O75746 678 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 SCELO95171 688 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 MTHFD2P13995 350 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 TFEBP19484 476 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CASQ1P31415 396 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CYB561P49447 251 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 HLCSP50747 726 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CLCN2P51788 898 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms