RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ATP5A1P25705 553 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 CASP2P42575 452 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 HNRNPH2P55795 449 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 MLF1P58340 268 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 RPS13P62277 151 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 SETDB1Q15047 1291 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 OR1C1Q15619 314 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF766Q5HY98 468 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 TCHHL1Q5QJ38 904 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 QSOX2Q6ZRP7 698 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 GALNTL5Q7Z4T8 443 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 GOLGA7Q7Z5G4 137 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 FJX1Q86VR8 437 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 RPS19BP1Q86WX3 136 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 HPS6Q86YV9 775 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 LAS2Q8IYD9 372 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 CPSF7Q8N684 471 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PTGR2Q8N8N7 351 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 ACOT4Q8N9L9 421 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 ST6GALNAC3Q8NDV1 305 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 HUS1BQ8NHY5 278 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PTPMT1Q8WUK0 201 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 UBTD2Q8WUN7 234 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 TM9SF4Q92544 642 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 NCLNQ969V3 563 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PHF21BQ96EK2 531 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PTCD3Q96EY7 689 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PAFAH2Q99487 392 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 LPAR4Q99677 370 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 RHOXF2Q9BQY4 288 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 FUT8Q9BYC5 575 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PHACTR1Q9C0D0 580 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 NT5DC2Q9H857 520 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 NMRAL1Q9HBL8 299 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PRDM9Q9NQV7 894 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PRTFDC1Q9NRG1 225 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 FARSBQ9NSD9 589 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 DEPPQ9NTK1 212 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 OLAHQ9NV23 265 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 SH3BGRL2Q9UJC5 107 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF225Q9UK10 706 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 FBXW2Q9UKT8 454 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 DAPP1Q9UN19 280 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 TRAV17A0A0B4J275 112 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 DYTNA2CJ06 578 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 ANKDD1BA6NHY2 528 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 TRIM49D1C9J1S8 452 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 PLPP1O14494 284 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 PCDH17O14917 1159 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 FGF17O60258 216 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 NME6O75414 186 aaPredicted RBP8.98□□□□□ -0.97
SSBP3-215ENST00000533946 UNC5CO95185 931 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 KLHL2O95198 593 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 DDAH2O95865 285 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 UQCRHP07919 91 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 CRABP2P29373 138 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 TYK2P29597 1187 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 CDH13P55290 713 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 RAB38P57729 211 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 GPR85P60893 370 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 CKAP4Q07065 602 aaKnown RBP8.98□□□□□ -0.97
SSBP3-215ENST00000533946 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF750Q32MQ0 723 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 C3P1Q6ZMU1 363 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 TBC1D1Q86TI0 1168 aaPredicted RBP8.98□□□□□ -0.97
SSBP3-215ENST00000533946 SIMC1Q8NDZ2 872 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 NR4A3Q92570 626 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 ZBTB9Q96C00 473 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 SCMH1Q96GD3 660 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 HBEGFQ99075 208 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 TXLNGYQ9BZA5 131 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 EHD1Q9H4M9 534 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 DMRT3Q9NQL9 472 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 GPRC5BQ9NZH0 403 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 XPR1Q9UBH6 696 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 OPTCQ9UBM4 332 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 ATG4BQ9Y4P1 393 aa8.98□□□□□ -0.97
SSBP3-215ENST00000533946 A0A087X1B8 175 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 A0A1W2PR48 441 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 GOLGA8RI6L899 631 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 WWP2O00308 870 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 B3GALT2O43825 422 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SHBGP04278 402 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 GFAPP14136 432 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 EDN3P14138 238 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 PRF1P14222 555 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 CHN1P15882 459 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 EEF1DP29692 281 aaKnown RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 BSGP35613 385 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 MTTPP55157 894 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 STXBP1P61764 594 aaKnown RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 OC90Q02509 493 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 DUSP2Q05923 314 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 TRAF3Q13114 568 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SLC13A2Q13183 592 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SLAMF1Q13291 335 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 GTF2H2Q13888 395 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms