RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ZNF879B4DU55 563 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 CLIC1O00299 241 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 TSPAN33Q86UF1 283 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 GALNT12Q8IXK2 581 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 ARL14Q8N4G2 192 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 GEMIN6Q8WXD5 167 aaKnown RBP10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC12A9Q9BXP2 914 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEM5Q9Y2B1 443 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 RREB1Q92766 1687 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 PRSS38A1L453 326 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 NPIPB15A6NHN6 443 aaPredicted RBP10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 AQP9O43315 295 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 CD1DP15813 335 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 FAUP35544 74 aaKnown RBP10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 PXNP49023 591 aaPredicted RBP10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 ATP4BP51164 291 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 PTPRCAPQ14761 206 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF678Q5SXM1 525 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF440Q8IYI8 595 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 COL21A1Q96P44 957 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 CDK15Q96Q40 435 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 CDC6Q99741 560 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 PRSS16Q9NQE7 514 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 PCDHGB5Q9Y5G0 923 aa10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 OAS3Q9Y6K5 1087 aaKnown RBP10.83□□□□□ -0.68
AMBRA1-211ENST00000533727 OR1I1O60431 355 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 UGDHO60701 494 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 GADD45GO95257 159 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 CD72P21854 359 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 GPX6P59796 221 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 GPR68Q15743 365 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF77Q15935 545 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TTLL10Q6ZVT0 673 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 OR10A6Q8NH74 314 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 CD320Q9NPF0 282 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 NKX1-2Q9UD57 310 aaPredicted RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 FOXO6A8MYZ6 492 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 P04436 131 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 YES1P07947 543 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 LINGO3P0C6S8 592 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 ANXA8P13928 327 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TIA1P31483 386 aaKnown RBP eCLIP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 SELENOVP59797 346 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 MRPL58Q14197 206 aaKnown RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 NFE2L1Q14494 772 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 EML3Q32P44 896 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF829Q3KNS6 432 aaPredicted RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 C9orf50Q5SZB4 431 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TLDC1Q6P9B6 456 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 KDELC1Q6UW63 502 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 PAQR9Q6ZVX9 377 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 AHSA2Q719I0 299 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 BBS10Q8TAM1 723 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 C10orf82Q8WW14 230 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 COPS4Q9BT78 406 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TOR3AQ9H497 397 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 PDP1Q9P0J1 537 aaPredicted RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 RNF11Q9Y3C5 154 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 A0A1B0GUL6 1792 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 DOCK1Q14185 1865 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 M0QX08 132 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 RRP8O43159 456 aaKnown RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 SMAD6O43541 496 aaKnown RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 C9P02748 559 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 JUNP05412 331 aaKnown RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 UQCRC2P22695 453 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 RORAP35398 523 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 XKP51811 444 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 DEFB133Q30KQ1 61 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TRIM61Q5EBN2 209 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 OR8H3Q8N146 312 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 LRRC25Q8N386 305 aaPredicted RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 SPEM1Q8N4L4 309 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 OR2L2Q8NH16 312 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 RNASE11Q8TAA1 199 aaKnown RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 PHOSPHO1Q8TCT1 267 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 AKTIPQ9H8T0 292 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 KCNK12Q9HB15 430 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 ACTR10Q9NZ32 417 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 HEMK1Q9Y5R4 338 aaPredicted RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 GABBR2O75899 941 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 RCBTB2O95199 551 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 F3P13726 295 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 CREB1P16220 341 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 FOXN2P32314 431 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 GDF5P43026 501 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 PLCXD2Q0VAA5 305 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 BNIP3Q12983 259 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 MAPK14Q16539 360 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEM198Q66K66 360 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 LCTLQ6UWM7 567 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 GALNT5Q7Z7M9 940 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEFF1Q8IYR6 380 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 RASGEF1AQ8N9B8 481 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 BMFQ96LC9 184 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms