RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SNRPNP63162 240 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 BTN3A2P78410 334 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 STX3Q13277 289 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 ARL13AQ5H913 290 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 JMJD6Q6NYC1 403 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 TRIM40Q6P9F5 258 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 NDUFAF7Q7L592 441 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 VN1R5Q7Z5H4 357 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 CUZD1Q86UP6 607 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 TRIM42Q8IWZ5 723 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 RBMXL3Q8N7X1 1067 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZNF473Q8WTR7 871 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 GAL3ST3Q96A11 431 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 PNPLA2Q96AD5 504 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 MIB2Q96AX9 1013 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 KCNA7Q96RP8 456 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 SLC6A16Q9GZN6 736 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 LHPPQ9H008 270 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 OR51B5Q9H339 312 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 KLHL31Q9H511 634 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 COPS7BQ9H9Q2 264 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 MED4Q9NPJ6 270 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 DMRT3Q9NQL9 472 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZNF225Q9UK10 706 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 NAALAD2Q9Y3Q0 740 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 TIMM22Q9Y584 194 aa12.21□□□□□ -0.45
TRAPPC4-212ENST00000533058 LRIT2A6NDA9 550 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 ZNF860A6NHJ4 632 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 MAGEB17A8MXT2 336 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 TMEM114B3SHH9 223 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SGK494L7N484 410 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 AZIN1O14977 448 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 GALR3O60755 368 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 ULK1O75385 1050 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 RDH16O75452 317 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 LYPLA1O75608 230 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 B3GALT4O96024 378 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 PDYNP01213 254 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SMIM10L1P0DMW3 83 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 CHN1P15882 459 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 GRK2P25098 689 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 ITGA3P26006 1051 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 PTX3P26022 381 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 HNRNPH1P31943 449 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 AP2B1P63010 937 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 MAT1AQ00266 395 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 IMPG1Q17R60 797 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SYT16Q17RD7 645 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 NADK2Q4G0N4 442 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 TMEM35AQ53FP2 167 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 TCHHL1Q5QJ38 904 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SH2D4BQ5SQS7 431 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 C10orf62Q5T681 223 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 AGAP7PQ5VUJ5 663 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 IRAK1BP1Q5VVH5 260 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 KHDRBS2Q5VWX1 349 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 FAM219BQ5XKK7 198 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 ATG16L1Q676U5 607 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 CLEC6AQ6EIG7 209 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SCIMPQ6UWF3 145 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 RIPOR1Q6ZS17 1223 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 PRSS41Q7RTY9 318 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 PDSS2Q86YH6 399 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 PRSS58Q8IYP2 241 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SRFBP1Q8NEF9 429 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 OR2L5Q8NG80 312 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 OR51Q1Q8NH59 317 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 WDR20Q8TBZ3 569 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 MS4A6EQ96DS6 147 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SMIM10Q96HG1 83 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 AGAP4Q96P64 663 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 OR1F2PQ96R84 312 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 HBEGFQ99075 208 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SERPINI1Q99574 410 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 MS4A8Q9BY19 250 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 TRIM4Q9C037 500 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 ZNF700Q9H0M5 742 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 FARSBQ9NSD9 589 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 INTS9Q9NV88 658 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 HCN3Q9P1Z3 774 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
TRAPPC4-212ENST00000533058 IGHV1-45A0A0A0MS14 117 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 NSG1A0A0A6YYJ2 146 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 TTLL8A6PVC2 850 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 MASP2O00187 686 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 FOXE1O00358 373 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 ALOX12BO75342 701 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 SERPINA7P05543 415 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 UROSP10746 265 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 COX6A1P12074 109 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 ICAM2P13598 275 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 SERPINB3P29508 390 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 SSR2P43308 183 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 XCR1P46094 333 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 SLC1A6P48664 564 aa12.19□□□□□ -0.46
TRAPPC4-212ENST00000533058 HTR6P50406 440 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms