RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 GPR85P60893 370 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 IRF8Q02556 426 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 TGM3Q08188 693 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 STX4Q12846 297 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 DOC2AQ14183 400 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 RCN2Q14257 317 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 PAGE2BQ5JRK9 111 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 ADNP2Q6IQ32 1131 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 RAPH1Q70E73 1250 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 MDGA2Q7Z553 956 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 DOLPP1Q86YN1 238 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 EID3Q8N140 333 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 MTFMTQ96DP5 389 aaKnown RBP16.6■□□□□ 0.25
PCF11-206ENST00000533018 QRFPRQ96P65 431 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 F2RL3Q96RI0 385 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 CSF3RQ99062 836 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 RBBP8Q99708 897 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 ERP44Q9BS26 406 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 EFCAB11Q9BUY7 163 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 EHD1Q9H4M9 534 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 ADAP2Q9NPF8 381 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 KCMF1Q9P0J7 381 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 WHRNQ9P202 907 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 ZNF490Q9ULM2 529 aaPredicted RBP16.6■□□□□ 0.25
PCF11-206ENST00000533018 DAPP1Q9UN19 280 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 YARS2Q9Y2Z4 477 aaKnown RBP16.6■□□□□ 0.25
PCF11-206ENST00000533018 FBN2P35556 2912 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 ADGRG4Q8IZF6 3080 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 A0A1B0GTH9 108 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 TCRBV9S1A1TA0A576 114 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 A8MVJ9 347 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 TGFBR3LH3BV60 316 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 EIF3HO15372 352 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCF11-206ENST00000533018 HS6ST1O60243 411 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 PTGS2P35354 604 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 GP5P40197 560 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 RAB10P61026 200 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 CHIT1Q13231 466 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 LAPTM5Q13571 262 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 SLMAPQ14BN4 828 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 ADPRMQ3LIE5 342 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 CDKL4Q5MAI5 379 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 ABHD17CQ6PCB6 329 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 C16orf47Q6ZP98 133 aaPredicted RBP16.59■□□□□ 0.25
PCF11-206ENST00000533018 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 CCDC25Q86WR0 208 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 ARMC10Q8N2F6 343 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 TMEM132CQ8N3T6 1108 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 GPR22Q99680 433 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 TIMMDC1Q9NPL8 285 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 HPF1Q9NWY4 346 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 ZNF223Q9UK11 482 aaPredicted RBP16.59■□□□□ 0.25
PCF11-206ENST00000533018 PYCARDQ9ULZ3 195 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 PPT2Q9UMR5 302 aa16.59■□□□□ 0.25
PCF11-206ENST00000533018 CYR61O00622 381 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 RAD51CO43502 376 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 PRAMEF4O60810 478 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 CTNSO60931 367 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 SH3BGRLO75368 114 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 OR2J2O76002 312 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 PDE9AO76083 593 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 WISP3O95389 354 aaPredicted RBP16.58■□□□□ 0.24
PCF11-206ENST00000533018 PCNAP12004 261 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 SPRP35270 261 aaPredicted RBP16.58■□□□□ 0.24
PCF11-206ENST00000533018 MSH2P43246 934 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 KCNC1P48547 511 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 C2orf54Q08AI8 447 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 EFTUD2Q15029 972 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCF11-206ENST00000533018 CDSNQ15517 529 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 ELAVL1Q15717 326 aaKnown RBP16.58■□□□□ 0.24
PCF11-206ENST00000533018 PRAMEF9Q5VWM5 478 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 IL20RBQ6UXL0 311 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 HSDL2Q6YN16 418 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 PPM1NQ8N819 430 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 SPATA4Q8NEY3 305 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 CA5BP1Q8WTZ4 195 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 ASB15Q8WXK1 588 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 DAZLQ92904 295 aaKnown RBP16.58■□□□□ 0.24
PCF11-206ENST00000533018 KIAA1191Q96A73 305 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 KCNC2Q96PR1 638 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 ALOXE3Q9BYJ1 711 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 CD244Q9BZW8 370 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 OR8D2Q9GZM6 311 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 ALG9Q9H6U8 611 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 COQ3Q9NZJ6 369 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 PTBP2Q9UKA9 531 aaKnown RBP16.58■□□□□ 0.24
PCF11-206ENST00000533018 ASB1Q9Y576 335 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 SPACA6W5XKT8 324 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 EML6Q6ZMW3 1958 aa16.58■□□□□ 0.24
PCF11-206ENST00000533018 OTOGQ6ZRI0 2925 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 TEP1Q99973 2627 aaKnown RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 ZNF407Q9C0G0 2248 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 SYNDIG1LA6NDD5 238 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 FAM159BA6NKW6 160 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 E9PLN8 166 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 C19orf84I3L1E1 186 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 WWP2O00308 870 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 PRKNO60260 465 aaPredicted RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 TBX6O95947 436 aaPredicted RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 TUBB4AP04350 444 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms