RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 NOCTQ9UK39 431 aaKnown RBP2.36□□□□□ -2.03
ATM-217ENST00000531957 MRPL11Q9Y3B7 192 aaKnown RBP2.36□□□□□ -2.03
ATM-217ENST00000531957 HBS1LQ9Y450 684 aaKnown RBP2.36□□□□□ -2.03
ATM-217ENST00000531957 KLK4Q9Y5K2 254 aa2.36□□□□□ -2.03
ATM-217ENST00000531957 COL16A1Q07092 1604 aaPredicted RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 CCDC162PA2VCL2 907 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 SRRM4A7MD48 611 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 CCDC188H7C350 402 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 LRRTM2O43300 516 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 ZNF253O75346 499 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 OR6B1O95007 311 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 ANGPTL1O95841 491 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 GBAP04062 536 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 DLATP10515 647 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 UMPSP11172 480 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 PTAFRP25105 342 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 PPP2R1AP30153 589 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 PRKCIP41743 596 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 IST1P53990 364 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 RAD23AP54725 363 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 BACE1P56817 501 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 RPS27AP62979 156 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 RPP38P78345 283 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 GSTO1P78417 241 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 CAPRIN1Q14444 709 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 ZNF79Q15937 498 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 TIMM50Q3ZCQ8 353 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 FAM91A1Q658Y4 838 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 TXNRD3NBQ6F5E7 133 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 RPUSD3Q6P087 351 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 ARMCX5Q6P1M9 558 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 TMEM182Q6ZP80 229 aaPredicted RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 RAPH1Q70E73 1250 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 MEX3DQ86XN8 651 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 OR6T1Q8NGN1 323 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 OR6F1Q8NGZ6 308 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 BPIFA2Q96DR5 249 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 RBM18Q96H35 190 aaKnown RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 RAB3IPQ96QF0 476 aaPredicted RBP2.35□□□□□ -2.03
ATM-217ENST00000531957 DHRS4-AS1Q9P1J3 65 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 IKZF3Q9UKT9 509 aa2.35□□□□□ -2.03
ATM-217ENST00000531957 NIP7Q9Y221 180 aaKnown RBP eCLIP2.35□□□□□ -2.03
ATM-217ENST00000531957 POGZQ7Z3K3 1410 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 BCLAF3A2AJT9 711 aaKnown RBP2.34□□□□□ -2.03
ATM-217ENST00000531957 ANHXE9PGG2 379 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 NEDD8-MDP1E9PL57 170 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 GRAP2O75791 330 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 KRT6AP02538 564 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 KRT6BP04259 564 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 APOA4P06727 396 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 GIG44P09565 113 aaPredicted RBP2.34□□□□□ -2.03
ATM-217ENST00000531957 ANKRD34CP0C6C1 535 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 SUPT20HL2P0C7V6 817 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 BRCC3P46736 316 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 NPBWR1P48145 328 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 KRT6CP48668 564 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 GMPSP49915 693 aaPredicted RBP2.34□□□□□ -2.03
ATM-217ENST00000531957 PTENP60484 403 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 CEACAM7Q14002 265 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 C16orf54Q6UWD8 224 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 TMEM64Q6YI46 380 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 PCGF5Q86SE9 256 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 C4orf19Q8IY42 314 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 TIGD4Q8IY51 512 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 PRR22Q8IZ63 422 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 LSMEM1Q8N8F7 131 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 SETD6Q8TBK2 473 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 RIT1Q92963 219 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 SLC35C1Q96A29 364 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 GBP5Q96PP8 586 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 RANBP9Q96S59 729 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 OR10A4Q9H209 315 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 FNDC4Q9H6D8 234 aaPredicted RBP2.34□□□□□ -2.03
ATM-217ENST00000531957 S100A14Q9HCY8 104 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 MED17Q9NVC6 651 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 FBXO7Q9Y3I1 522 aa2.34□□□□□ -2.03
ATM-217ENST00000531957 TRBV5-4A0A0C4DH59 114 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 SCO2O43819 266 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 RHBDL1O75783 438 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 KBTBD11O94819 623 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 FGF19O95750 216 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 PIGRP01833 764 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 OR9G9P0C7N8 305 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 TSPY3P0CV98 308 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 TSPY8P0CW00 308 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 EZRP15311 586 aaKnown RBP2.33□□□□□ -2.04
ATM-217ENST00000531957 SRD5A2P31213 254 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 ALDH3B1P43353 468 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 IGLV3-21P80748 117 aaPredicted RBP2.33□□□□□ -2.04
ATM-217ENST00000531957 NAAAQ02083 359 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 FOLH1Q04609 750 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 CNPY1Q3B7I2 92 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 VWA2Q5GFL6 755 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 TEX35Q5T0J7 233 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 LYPLAL1Q5VWZ2 237 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 LIPJQ5W064 366 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 REP15Q6BDI9 236 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 KLHL10Q6JEL2 608 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 NEPROQ6NW34 567 aa2.33□□□□□ -2.04
ATM-217ENST00000531957 CASC4Q6P4E1 433 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms