RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 COL21A1Q96P44 957 aa16.09■□□□□ 0.17
VPS26B-206ENST00000531741 MAPKAP1Q9BPZ7 522 aa16.09■□□□□ 0.17
VPS26B-206ENST00000531741 NLNQ9BYT8 704 aa16.09■□□□□ 0.17
VPS26B-206ENST00000531741 MIEF1Q9NQG6 463 aa16.09■□□□□ 0.17
VPS26B-206ENST00000531741 KCND3Q9UK17 655 aa16.09■□□□□ 0.17
VPS26B-206ENST00000531741 FAM32AQ9Y421 112 aaKnown RBP16.09■□□□□ 0.17
VPS26B-206ENST00000531741 ZBBXA8MT70 800 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 LZTS3O60299 673 aaPredicted RBP16.08■□□□□ 0.16
VPS26B-206ENST00000531741 DDX5P17844 614 aaKnown RBP16.08■□□□□ 0.16
VPS26B-206ENST00000531741 DDCP20711 480 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 C21orf33P30042 268 aaPredicted RBP16.08■□□□□ 0.16
VPS26B-206ENST00000531741 SLC19A1P41440 591 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 IER5LQ5T953 404 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 REEP3Q6NUK4 255 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 OR52J3Q8NH60 311 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 OR5AK3PQ8NH89 298 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 RPL3LQ92901 407 aaKnown RBP16.08■□□□□ 0.16
VPS26B-206ENST00000531741 NEURL3Q96EH8 262 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 ZNF764Q96H86 408 aaPredicted RBP16.08■□□□□ 0.16
VPS26B-206ENST00000531741 PELI2Q9HAT8 420 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 SPATA7Q9P0W8 599 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 DAPK2Q9UIK4 370 aa16.08■□□□□ 0.16
VPS26B-206ENST00000531741 PRRT4C9JH25 899 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 MPZL2O60487 215 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 MMP20O60882 483 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CCNB2O95067 398 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 ALOX5P09917 674 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 EPCAMP16422 314 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 SERPINB1P30740 379 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 HSD17B2P37059 387 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CTSKP43235 329 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 IRF3Q14653 427 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 TIGD6Q17RP2 521 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 FNDC3BQ53EP0 1204 aaKnown RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 SAXO2Q658L1 398 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 FAM83HQ6ZRV2 1179 aaPredicted RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 SLC46A3Q7Z3Q1 461 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 RBM12BQ8IXT5 1001 aaKnown RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 LMNTD1Q8N9Z9 388 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 APOBEC4Q8WW27 367 aaKnown RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 ING5Q8WYH8 240 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 OR5P2Q8WZ92 322 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 PROX1Q92786 737 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 ITPKCQ96DU7 683 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CRELD1Q96HD1 420 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 COX14Q96I36 57 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 FAM210AQ96ND0 272 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 FAM129BQ96TA1 746 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 ZNF717Q9BY31 904 aaPredicted RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 DCSTAMPQ9H295 470 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 MMP27Q9H306 513 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 C11orf49Q9H6J7 331 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 A4GALTQ9NPC4 353 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 ASF1AQ9Y294 204 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 TCF20Q9UGU0 1960 aaKnown RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 TRBC2A0A5B9 178 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 SH3D21A4FU49 640 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CACNB4O00305 520 aaPredicted RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 PLPP1O14494 284 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 AIREO43918 545 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 GADD45GO95257 159 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 RECKO95980 971 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CXCR2P25025 360 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CTNNB1P35222 781 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 SOAT1P35610 550 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 GSTM5P46439 218 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 IDH2P48735 452 aaKnown RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 UBE3AQ05086 875 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 DEPDC1Q5TB30 811 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 TMEM236Q5W0B7 351 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 ADAMTSL4Q6UY14 1074 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 C9orf43Q8TAL5 461 aaPredicted RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 NEURL2Q9BR09 285 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 PITHD1Q9GZP4 211 aaPredicted RBP16.07■□□□□ 0.16
VPS26B-206ENST00000531741 DSN1Q9H410 356 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 CXorf36Q9H7Y0 433 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 WASH6PQ9NQA3 447 aa16.07■□□□□ 0.16
VPS26B-206ENST00000531741 BOLA2-SMG1P6H3BVE0 249 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 TBX6O95947 436 aaPredicted RBP16.06■□□□□ 0.16
VPS26B-206ENST00000531741 IFNW1P05000 195 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 IMPDH2P12268 514 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 CD40LGP29965 261 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
VPS26B-206ENST00000531741 LIMK1P53667 647 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 CDC42P60953 191 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 OLR1P78380 273 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 TOR1AIP1Q5JTV8 583 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 KHDRBS2Q5VWX1 349 aaKnown RBP16.06■□□□□ 0.16
VPS26B-206ENST00000531741 ZNF770Q6IQ21 691 aaPredicted RBP16.06■□□□□ 0.16
VPS26B-206ENST00000531741 TUBA3EQ6PEY2 450 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 FAM92BQ6ZTR7 304 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 USP43Q70EL4 1123 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 PAGE2Q7Z2X7 111 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 C17orf64Q86WR6 236 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 OR9Q2Q8NGE9 314 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 PSMA8Q8TAA3 256 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 ZNF675Q8TD23 568 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 NT5DC2Q9H857 520 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 NEUROD4Q9HD90 331 aa16.06■□□□□ 0.16
VPS26B-206ENST00000531741 IMPAD1Q9NX62 359 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms