RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GRHL1Q9NZI5 618 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 CD274Q9NZQ7 290 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 DAPP1Q9UN19 280 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 ASB1Q9Y576 335 aa15.68■□□□□ 0.1
CPSF1-207ENST00000531727 APCP25054 2843 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 KLRC4-KLRK1H3BQV0 150 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 CYR61O00622 381 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 TFECO14948 347 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-207ENST00000531727 RAD51CO43502 376 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 PEX1O43933 1283 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 ZFAND5O76080 213 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 CLDN14O95500 239 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 C1QAP02745 245 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 S100BP04271 92 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-207ENST00000531727 GSTA2P09210 222 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 EPORP19235 508 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 PTGER1P34995 402 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 KCNC1P48547 511 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 TGM3Q08188 693 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 RCN2Q14257 317 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 ELAVL1Q15717 326 aaKnown RBP15.67■□□□□ 0.1
CPSF1-207ENST00000531727 PAGE2BQ5JRK9 111 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 C3orf62Q6ZUJ4 267 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 TMEM132CQ8N3T6 1108 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 TMEM156Q8N614 296 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 SPATA4Q8NEY3 305 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 C16orf52Q8NHV5 167 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 PHF10Q8WUB8 498 aaKnown RBP15.67■□□□□ 0.1
CPSF1-207ENST00000531727 KCNC2Q96PR1 638 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 F2RL3Q96RI0 385 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 PRDM7Q9NQW5 492 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 RNF112Q9ULX5 631 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 YARS2Q9Y2Z4 477 aaKnown RBP15.67■□□□□ 0.1
CPSF1-207ENST00000531727 CSMD1Q96PZ7 3565 aa15.67■□□□□ 0.1
CPSF1-207ENST00000531727 FBN2P35556 2912 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 E9PLN8 166 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 PRRG2O14669 202 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 PRKNO60260 465 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-207ENST00000531727 CCNT2O60583 730 aaKnown RBP15.66■□□□□ 0.1
CPSF1-207ENST00000531727 CTNSO60931 367 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 SPRP35270 261 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-207ENST00000531727 RFC3P40938 356 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 SSR4P51571 173 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 GPX6P59796 221 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 IRF8Q02556 426 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 EFTUD2Q15029 972 aaKnown RBP eCLIP15.66■□□□□ 0.14e-13■■■■■ 32.1
CPSF1-207ENST00000531727 CDSNQ15517 529 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 TBCCQ15814 346 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 HIST2H2ACQ16777 129 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-207ENST00000531727 GRTP1Q5TC63 336 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 HIST2H2AA3Q6FI13 130 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 NCCRP1Q6ZVX7 275 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-207ENST00000531727 LRRC70Q7Z2Q7 622 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 GDF7Q7Z4P5 450 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 MDGA2Q7Z553 956 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 CLNKQ7Z7G1 428 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 GPALPP1Q8IXQ4 340 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 MTFMTQ96DP5 389 aaKnown RBP15.66■□□□□ 0.1
CPSF1-207ENST00000531727 VKORC1Q9BQB6 163 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 CD244Q9BZW8 370 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 PHACTR1Q9C0D0 580 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 ROGDIQ9GZN7 287 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 LYRM4Q9HD34 91 aa15.66■□□□□ 0.1
CPSF1-207ENST00000531727 CREBBPQ92793 2442 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 TMEM200CA6NKL6 621 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 ADAM10O14672 748 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 IFNA16P05015 189 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 SNRPB2P08579 225 aaKnown RBP15.65■□□□□ 0.1
CPSF1-207ENST00000531727 CASP2P42575 452 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 C2orf54Q08AI8 447 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 CHIT1Q13231 466 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 BMPR2Q13873 1038 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 E2F2Q14209 437 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 CMPK2Q5EBM0 449 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 C3P1Q6ZMU1 363 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 C16orf47Q6ZP98 133 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-207ENST00000531727 CTAGE3PQ8IX95 158 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 EID3Q8N140 333 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 ZFP62Q8NB50 900 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-207ENST00000531727 SRFBP1Q8NEF9 429 aaKnown RBP15.65■□□□□ 0.1
CPSF1-207ENST00000531727 STAG3L4Q8TBR4 150 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 ANP32BQ92688 251 aaKnown RBP15.65■□□□□ 0.1
CPSF1-207ENST00000531727 DAZLQ92904 295 aaKnown RBP15.65■□□□□ 0.1
CPSF1-207ENST00000531727 EXT2Q93063 718 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 DMRTA2Q96SC8 542 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 TBCDQ9BTW9 1192 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 MS4A8Q9BY19 250 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 ALG9Q9H6U8 611 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 TIMMDC1Q9NPL8 285 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 KCMF1Q9P0J7 381 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 CLCA3PQ9Y6N3 262 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 ABCA12Q86UK0 2595 aa15.65■□□□□ 0.1
CPSF1-207ENST00000531727 A0A1B0GTH9 108 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 A8MVJ9 347 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 HS6ST1O60243 411 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 FAM155BO75949 473 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 OR2J2O76002 312 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 TUBB4AP04350 444 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 PTGS2P35354 604 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 GMPRP36959 345 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms