RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 CD96P40200 585 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 EFNA3P52797 238 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ARFIP1P53367 373 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 LIM2P55344 173 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ALDH6A1Q02252 535 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 SRSF11Q05519 484 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 PCDH1Q08174 1060 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 DDX39BQ13838 428 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 RUNX2Q13950 521 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ELAVL1Q15717 326 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 KRTCAP3Q53RY4 240 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 C10orf62Q5T681 223 aaPredicted RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 KHDRBS2Q5VWX1 349 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 SLC25A25Q6KCM7 469 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 MTFR2Q6P444 385 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 SCUBE1Q8IWY4 988 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 FAM47BQ8NA70 645 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 OR7G3Q8NG95 312 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 OR14A16Q8NHC5 309 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ZNF473Q8WTR7 871 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 RGMAQ96B86 450 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 PAFAH2Q99487 392 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 MS4A8Q9BY19 250 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 FUT8Q9BYC5 575 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 WDR41Q9HAD4 459 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 NECTIN3Q9NQS3 549 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 KLHL1Q9NR64 748 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ANKRD10Q9NXR5 420 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 COPS7AQ9UBW8 275 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 PLEKHB1Q9UF11 243 aaPredicted RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 DMGDHQ9UI17 866 aaKnown RBP11.77□□□□□ -0.53
C11orf54-210ENST00000531516 ZNF180Q9UJW8 692 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 FLNCQ14315 2725 aa11.77□□□□□ -0.53
C11orf54-210ENST00000531516 KLRC4-KLRK1H3BQV0 150 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 LRRTM2O43300 516 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 DNAJB6O75190 326 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 SLC25A12O75746 678 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 CLDN9O95484 217 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 TGFB1P01137 390 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 SP1P08047 785 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 SNRPAP09012 282 aaKnown RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 HIST1H1TP22492 207 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 BUD31P41223 144 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 CCNG1P51959 295 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 IRF9Q00978 393 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 DLG1Q12959 904 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 GTF2H2Q13888 395 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 PCBP2Q15366 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 MAPKAPK3Q16644 382 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 OR4C11Q6IEV9 310 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 GTF2H2CQ6P1K8 395 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 TRMT10CQ7L0Y3 403 aaKnown RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 CLNKQ7Z7G1 428 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 CENPLQ8N0S6 344 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 EID3Q8N140 333 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 ACOT4Q8N9L9 421 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 NOA1Q8NC60 698 aaKnown RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 MTBPQ96DY7 904 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 MAGED4Q96JG8 741 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 IPPKQ9H8X2 491 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 AHSPQ9NZD4 102 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 ERRFI1Q9UJM3 462 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 KLF13Q9Y2Y9 288 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-210ENST00000531516 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
C11orf54-210ENST00000531516 LRRK2Q5S007 2527 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 TRGV8A0A0C4DH27 118 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 H0YIV9 168 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 STX16O14662 325 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 UNC5CO95185 931 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 ALDOAP04075 364 aaKnown RBP11.75□□□□□ -0.53
C11orf54-210ENST00000531516 TAC1P20366 129 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 ATP5A1P25705 553 aaKnown RBP11.75□□□□□ -0.53
C11orf54-210ENST00000531516 TPP2P29144 1249 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-210ENST00000531516 HLCSP50747 726 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 SSR4P51571 173 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 MLF1P58340 268 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 IFT88Q13099 833 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 SLAMF1Q13291 335 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 E2F2Q14209 437 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 CPSF6Q16630 551 aaKnown RBP eCLIP11.75□□□□□ -0.53
C11orf54-210ENST00000531516 DEPDC1Q5TB30 811 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 SPINK14Q6IE38 97 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 CYP20A1Q6UW02 462 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 HSDL2Q6YN16 418 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 MAMDC2Q7Z304 686 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-210ENST00000531516 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 GPALPP1Q8IXQ4 340 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 KIF2BQ8N4N8 673 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 PTGR2Q8N8N7 351 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-210ENST00000531516 POGLUT1Q8NBL1 392 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 MORN4Q8NDC4 146 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 MDS2Q8NDY4 140 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 OR5L2Q8NGL0 311 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 HUS1BQ8NHY5 278 aa11.75□□□□□ -0.53
C11orf54-210ENST00000531516 TANKQ92844 425 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms