RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SEC16BQ96JE7 1060 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 QRFPRQ96P65 431 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 NPLQ9BXD5 320 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ADAP2Q9NPF8 381 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 HPF1Q9NWY4 346 aa17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 NIPBLQ6KC79 2804 aaeCLIP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 ZNF469Q96JG9 3925 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-206ENST00000531405 NPIPA2E9PIF3 369 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 NPIPA3F8WFD2 350 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 WWP2O00308 870 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 CLDN4O14493 209 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 B3GALT2O43825 422 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 H2AFYO75367 372 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 CERS1P27544 350 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 SLC6A12P48065 614 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 HNMTP50135 292 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 NUP107P57740 925 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 TAS2R39P59534 338 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 CDKL1Q00532 357 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 PLGLB1Q02325 96 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 PMPCAQ10713 525 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 BMPR2Q13873 1038 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 FBXO48Q5FWF7 155 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 VN1R5Q7Z5H4 357 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 NKAPQ8N5F7 415 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 ZNF321PQ8N8H1 164 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 OR2M7Q8NG81 312 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 SLCO2A1Q92959 643 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 RHBDF1Q96CC6 855 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 PNPLA3Q9NST1 481 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 CTNNAL1Q9UBT7 734 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 SNX12Q9UMY4 172 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 LIPGQ9Y5X9 500 aa17.11■□□□□ 0.33
SSSCA1-206ENST00000531405 CYR61O00622 381 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 IFNA16P05015 189 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 MSX1P28360 303 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 LIM2P55344 173 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 MORF4L2Q15014 288 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 ZNF750Q32MQ0 723 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 ZNF595Q8IYB9 648 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 TTLQ8NG68 377 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 OR2L5Q8NG80 312 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 OR5M9Q8NGP3 310 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 OR5M3Q8NGP4 307 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 RASL10BQ96S79 203 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 TTTY12Q9BZ98 90 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 REXO4Q9GZR2 422 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 KCNJ16Q9NPI9 418 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 MYOTQ9UBF9 498 aa17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 MRPS33Q9Y291 106 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-206ENST00000531405 PRAMEF4O60810 478 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 KRT38O76015 456 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 HK2P52789 917 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 MGAT5Q09328 741 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 FASTKD3Q14CZ7 662 aaKnown RBP17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 ELAVL1Q15717 326 aaKnown RBP17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 GXYLT1Q4G148 440 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 PRAMEF9Q5VWM5 478 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 TRIM40Q6P9F5 258 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 ADAMTSL2Q86TH1 951 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 GPALPP1Q8IXQ4 340 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 DMRTC2Q8IXT2 367 aaPredicted RBP17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 KRT78Q8N1N4 520 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 TMEM132CQ8N3T6 1108 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 SPATA6LQ8N4H0 392 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 PTPMT1Q8WUK0 201 aaPredicted RBP17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 CAPZA3Q96KX2 299 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 SERINC2Q96SA4 455 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 TMEM79Q9BSE2 394 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 ZDHHC11Q9H8X9 412 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 TNFRSF10DQ9UBN6 386 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 DAPP1Q9UN19 280 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 CLCA3PQ9Y6N3 262 aa17.09■□□□□ 0.33
SSSCA1-206ENST00000531405 A0A088AWK7 358 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ANKDD1BA6NHY2 528 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ACOT7O00154 380 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 TAPBPO15533 448 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF354AO60765 605 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 CLEC3AO75596 197 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 PIAS1O75925 651 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF10P21506 573 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 TGFBIQ15582 683 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ADPRMQ3LIE5 342 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ABHD17CQ6PCB6 329 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 PAOXQ6QHF9 649 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 HSDL2Q6YN16 418 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 TMEM200AQ86VY9 491 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 KLHL7Q8IXQ5 586 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 NRGNQ92686 78 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ESAMQ96AP7 390 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 LRRC39Q96DD0 335 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 SCYL1Q96KG9 808 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 F2RL3Q96RI0 385 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF559Q9BR84 538 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ALOXE3Q9BYJ1 711 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 OR8D2Q9GZM6 311 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 NT5DC2Q9H857 520 aa17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 COPS7BQ9H9Q2 264 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF490Q9ULM2 529 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms