RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 CMPK2Q5EBM0 449 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 SPANXN4Q5MJ08 99 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 ANKRD26P1Q6NSI1 321 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 PDSS2Q86YH6 399 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 MMP21Q8N119 569 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 ZCCHC7Q8N3Z6 543 aaKnown RBP13.22□□□□□ -0.29
NXF1-207ENST00000530875 DTWD1Q8N5C7 304 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
NXF1-207ENST00000530875 ZNF501Q96CX3 271 aaPredicted RBP13.22□□□□□ -0.29
NXF1-207ENST00000530875 SPDL1Q96EA4 605 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 C10orf90Q96M02 699 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 SLC25A23Q9BV35 468 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 SLC52A3Q9NQ40 469 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 TMEM45AQ9NWC5 275 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 NDE1Q9NXR1 346 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 FBXW2Q9UKT8 454 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 EXO1Q9UQ84 846 aaKnown RBP13.22□□□□□ -0.29
NXF1-207ENST00000530875 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
NXF1-207ENST00000530875 HYKKA2RU49 373 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 FITM1A5D6W6 292 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 ZNF860A6NHJ4 632 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 PRMT3O60678 531 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 DNAJB6O75190 326 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 RFPL3O75679 317 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 MSL3P1P0C860 447 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 PCSK2P16519 638 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 OLR1P78380 273 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 ZFP36L1Q07352 338 aaKnown RBP13.21□□□□□ -0.29
NXF1-207ENST00000530875 ART3Q13508 389 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 UGT8Q16880 541 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 PGS1Q32NB8 556 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 FAM71E1Q6IPT2 247 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 BNC2Q6ZN30 1099 aaPredicted RBP13.21□□□□□ -0.29
NXF1-207ENST00000530875 HIPK4Q8NE63 616 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 OR7A2PQ8NGA2 310 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 SLC26A7Q8TE54 656 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 JADE3Q92613 823 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 SERINC2Q96SA4 455 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 NPAS2Q99743 824 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 EFCAB1Q9HAE3 211 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 FANCEQ9HB96 536 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
NXF1-207ENST00000530875 PACSIN3Q9UKS6 424 aa13.21□□□□□ -0.29
NXF1-207ENST00000530875 CCDC154A6NI56 674 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 FBP2O00757 339 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 SCAMP2O15127 329 aaKnown RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 CFLARO15519 480 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 B3GALT2O43825 422 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 GALR3O60755 368 aaPredicted RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 COX7A2P14406 83 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ACADSP16219 412 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ZNF10P21506 573 aaPredicted RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 HPCAL1P37235 193 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ITGA1P56199 1179 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 C21orf58P58505 322 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 NHLH1Q02575 133 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 FOXM1Q08050 763 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 STX5Q13190 355 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ILKQ13418 452 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 TRA2AQ13595 282 aaKnown RBP eCLIP13.21□□□□□ -0.36e-8■■■■□ 25.7
NXF1-207ENST00000530875 GRM7Q14831 915 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 C16orf72Q14CZ0 275 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 TRIP6Q15654 476 aaKnown RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 NDUFA9Q16795 377 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 PRAMEF17Q5VTA0 474 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 MRM1Q6IN84 353 aaKnown RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 RBM44Q6ZP01 1051 aaKnown RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 IKBIPQ70UQ0 350 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 PGAM4Q8N0Y7 254 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 DEFB124Q8NES8 71 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 OR9A4Q8NGU2 314 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 TESCQ96BS2 214 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 OR6C1Q96RD1 312 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 CDRT15Q96T59 188 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 REEP4Q9H6H4 257 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 WDR41Q9HAD4 459 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 TOR4AQ9NXH8 423 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 SERTAD3Q9UJW9 196 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 NDUFAF1Q9Y375 327 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ATG4BQ9Y4P1 393 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ASB4Q9Y574 426 aa13.21□□□□□ -0.3
NXF1-207ENST00000530875 ZFHX2Q9C0A1 2572 aaPredicted RBP13.21□□□□□ -0.3
NXF1-207ENST00000530875 A0A0A6YYC8 382 aaPredicted RBP13.2□□□□□ -0.3
NXF1-207ENST00000530875 A0A1W2PP18 115 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 ASPDHA6ND91 283 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 GABRR3A8MPY1 467 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 I3L1I5 382 aaPredicted RBP13.2□□□□□ -0.3
NXF1-207ENST00000530875 SGK494L7N484 410 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 ANGPT2O15123 496 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 HYAL3O43820 417 aaPredicted RBP13.2□□□□□ -0.3
NXF1-207ENST00000530875 PIM1P11309 404 aaPredicted RBP13.2□□□□□ -0.3
NXF1-207ENST00000530875 CSTF2P33240 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
NXF1-207ENST00000530875 CLDN6P56747 220 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 TRA2BP62995 288 aaKnown RBP13.2□□□□□ -0.3
NXF1-207ENST00000530875 E2F1Q01094 437 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 ACY1Q03154 408 aa13.2□□□□□ -0.3
NXF1-207ENST00000530875 KLC1Q07866 573 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms