RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MAGEB2O15479 319 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 CHRNGP07510 517 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ANPEPP15144 967 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 MYOGP15173 224 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 AREGP15514 252 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF26P17031 533 aaPredicted RBP3.93□□□□□ -1.78
C11orf88-204ENST00000529661 FCARP24071 287 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 CTNNA2P26232 953 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 MAPK3P27361 379 aaPredicted RBP3.93□□□□□ -1.78
C11orf88-204ENST00000529661 FEN1P39748 380 aaKnown RBP3.93□□□□□ -1.78
C11orf88-204ENST00000529661 IRX4P78413 519 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 FAM106AQ4KMX7 169 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 TOR1AIP1Q5JTV8 583 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ATP1A1-AS1Q5TC04 95 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 SNRNP48Q6IEG0 339 aaKnown RBP3.93□□□□□ -1.78
C11orf88-204ENST00000529661 DLEU7Q6UYE1 221 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ADAMTSL2Q86TH1 951 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 LCA5Q86VQ0 697 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ELMOD2Q8IZ81 293 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 OR5T2Q8NGG2 359 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 GANCQ8TET4 914 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 PRCCQ92733 491 aaPredicted RBP3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF599Q96NL3 588 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 NYXQ9GZU5 481 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 WDR13Q9H1Z4 485 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 C1orf21Q9H246 121 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 MTIF3Q9H2K0 278 aaKnown RBP3.93□□□□□ -1.78
C11orf88-204ENST00000529661 TSPY26PQ9H489 355 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 DPEP3Q9H4B8 488 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 MARCH7Q9H992 704 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 KCNN3Q9UGI6 736 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 CCPG1Q9ULG6 757 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 WDR37Q9Y2I8 494 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 ETV7Q9Y603 341 aa3.93□□□□□ -1.78
C11orf88-204ENST00000529661 hCG_38984A0A1B0GV85 526 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 A0A1W2PR80 420 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 MACROD2A1Z1Q3 448 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 C15orf61A6NNL5 157 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 LMO7DNF2Z398 122 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 SLC1A7O00341 560 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 CHUKO15111 745 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 HMMRO75330 724 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 B3GALNT1O75752 331 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 CEACAM4O75871 244 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 SLC4A1P02730 911 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 GSTA2P09210 222 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF18P17022 549 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 DESP17661 470 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 ACP1P24666 158 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 EDNRAP25101 427 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 ACKR3P25106 362 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 STIP1P31948 543 aaKnown RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 TNFSF10P50591 281 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 HNRNPFP52597 415 aaKnown RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 ATXN3P54252 364 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 PAX9P55771 341 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 BTG1P62324 171 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 IRX1P78414 480 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 GALK2Q01415 458 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 MFGE8Q08431 387 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 EPC2Q52LR7 807 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 HERC4Q5GLZ8 1057 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 CASC1Q6TDU7 716 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 MFSD7Q6UXD7 560 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 NLRP14Q86W24 1093 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 SLC22A15Q8IZD6 547 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 BATF2Q8N1L9 274 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 SLC43A2Q8N370 569 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 CNNM3Q8NE01 707 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 TMEM185AQ8NFB2 350 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 OR13C5Q8NGS8 318 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 OR4A16Q8NH70 328 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 MAPK15Q8TD08 544 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 MRGPRDQ8TDS7 321 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 SMAP2Q8WU79 429 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 GMPPAQ96IJ6 420 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 RUNDC3BQ96NL0 473 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 PCDHB18PQ96TA0 734 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 SSX3Q99909 188 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 PAPOLGQ9BWT3 736 aaKnown RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF665Q9H7R5 613 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 DBF4Q9UBU7 674 aaPredicted RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 TEKT2Q9UIF3 430 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 EXOC7Q9UPT5 735 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 PIN4Q9Y237 131 aaKnown RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 MRPS2Q9Y399 296 aaKnown RBP3.92□□□□□ -1.78
C11orf88-204ENST00000529661 PYGO1Q9Y3Y4 419 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 RAD54L2Q9Y4B4 1467 aa3.92□□□□□ -1.78
C11orf88-204ENST00000529661 A0A087X002 238 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 NPIPB9F8W1W9 429 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF195O14628 629 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 REC8O95072 547 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 PGK2P07205 417 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ETS1P14921 441 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 CCNA2P20248 432 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 HLA-FP30511 346 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 CD86P42081 329 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 NSFP46459 744 aaKnown RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 TAF6P49848 677 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 SRP54P61011 504 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms