RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GLSO94925 669 aaPredicted RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 B3GALT4O96024 378 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 P04436 131 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 HEXAP06865 529 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 NPPBP16860 134 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 AHRP35869 848 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 HNF4AP41235 474 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 ASCL1P50553 236 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 NR0B1P51843 470 aaKnown RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 RAB8AP61006 207 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 KIF5AQ12840 1032 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SP140Q13342 867 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 BMPR2Q13873 1038 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 DHX34Q14147 1143 aaKnown RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 CSHL1Q14406 222 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 DAZAP2Q15038 168 aaPredicted RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 BBS9Q3SYG4 887 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TMEM198Q66K66 360 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 DUPD1Q68J44 220 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 RTL4Q6ZR62 310 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SLC13A5Q86YT5 568 aaPredicted RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 MYO1HQ8N1T3 1032 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TMEM132CQ8N3T6 1108 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TMEM251Q8N6I4 163 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 LRRN4CLQ8ND94 238 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TRPV3Q8NET8 790 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 OR4K1Q8NGD4 311 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 UTP15Q8TED0 518 aaKnown RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 SNF8Q96H20 258 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 HES6Q96HZ4 224 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 PDLIM2Q96JY6 352 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 FAR2Q96K12 515 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SGCZQ96LD1 299 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SMR3AQ99954 134 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SGPP1Q9BX95 441 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TRIM54Q9BYV2 358 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TRIM5Q9C035 493 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 FBXO6Q9NRD1 293 aaPredicted RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 PRTFDC1Q9NRG1 225 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 SACM1LQ9NTJ5 587 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 MYOTQ9UBF9 498 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 MTRF1LQ9UGC7 380 aaKnown RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 MRPS33Q9Y291 106 aaKnown RBP8.34□□□□□ -1.07
VPS11-203ENST00000529545 MAD1L1Q9Y6D9 718 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 CLCA3PQ9Y6N3 262 aa8.34□□□□□ -1.07
VPS11-203ENST00000529545 TRGV5A0A0B4J1U4 118 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 MAGEB16A2A368 324 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 TUBAL3A6NHL2 446 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 WWP2O00308 870 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 HCN1O60741 890 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 OR6B1O95007 311 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 ATE1O95260 518 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 IFNA16P05015 189 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 TPSB2P20231 275 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 BMP5P22003 454 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 TACR1P25103 407 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 SOX3P41225 446 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 SCTRP47872 440 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 HSD17B7P56937 341 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 NKX6-1P78426 367 aaPredicted RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 SLC13A2Q13183 592 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 CTBP1Q13363 440 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 TPSAB1Q15661 275 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 CCNG2Q16589 344 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 ZNF750Q32MQ0 723 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 SHEQ5VZ18 495 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 ZNF549Q6P9A3 640 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 HSDL2Q6YN16 418 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 MBOAT1Q6ZNC8 495 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 KIF18BQ86Y91 864 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 DENND6AQ8IWF6 608 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 GOLM1Q8NBJ4 401 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 CD200R1Q8TD46 325 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 CALML6Q8TD86 181 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 ATL1Q8WXF7 558 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 SLCO2A1Q92959 643 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 RNASE6Q93091 150 aaKnown RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 ZNF669Q96BR6 464 aaPredicted RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 PYCR2Q96C36 320 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 RASL10BQ96S79 203 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 AIF1LQ9BQI0 150 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 LIN28AQ9H9Z2 209 aaKnown RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 ADAP2Q9NPF8 381 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 ARL15Q9NXU5 204 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 ZNF223Q9UK11 482 aaPredicted RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 ADAMTS6Q9UKP5 1117 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 CBLCQ9ULV8 474 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 PPIEQ9UNP9 301 aaKnown RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 MED16Q9Y2X0 877 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 REXO2Q9Y3B8 237 aaKnown RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 LIPGQ9Y5X9 500 aa8.33□□□□□ -1.08
VPS11-203ENST00000529545 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.33□□□□□ -1.08
VPS11-203ENST00000529545 ARHGAP21Q5T5U3 1957 aa8.32□□□□□ -1.08
VPS11-203ENST00000529545 A0A088AWK7 358 aa8.32□□□□□ -1.08
VPS11-203ENST00000529545 A0A0G2JMM0 328 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms