RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 MED25Q71SY5 747 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 CUZD1Q86UP6 607 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 APLFQ8IW19 511 aaPredicted RBP16.74■□□□□ 0.27
NXF1-206ENST00000527902 ANKRD42Q8N9B4 389 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 EXD3Q8N9H8 876 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 FAM47BQ8NA70 645 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 APOBEC4Q8WW27 367 aaKnown RBP16.74■□□□□ 0.27
NXF1-206ENST00000527902 NACC2Q96BF6 587 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 CNDP1Q96KN2 507 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 IP6K3Q96PC2 410 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 BBC3Q96PG8 261 aaPredicted RBP16.74■□□□□ 0.27
NXF1-206ENST00000527902 ACPTQ9BZG2 426 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 ROGDIQ9GZN7 287 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 ING2Q9H160 280 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 VIPAS39Q9H9C1 493 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 BRF2Q9HAW0 419 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 SLC12A4Q9UP95 1085 aa16.74■□□□□ 0.27
NXF1-206ENST00000527902 LOC102723996A0A087X1L8 192 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 A0A0A6YYD5 115 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 A0A1W2PQ72 361 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 TGFBR3LH3BV60 316 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 CYR61O00622 381 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 PEX12O00623 359 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 TMPRSS11DO60235 418 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 ULK1O75385 1050 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 GBAP04062 536 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 C8orf89P0DMQ9 161 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 ACPPP15309 386 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 ARFIP1P53367 373 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 GALNT1Q10472 559 aaPredicted RBP16.73■□□□□ 0.27
NXF1-206ENST00000527902 TBL3Q12788 808 aaKnown RBP16.73■□□□□ 0.27
NXF1-206ENST00000527902 RCN2Q14257 317 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 ARL13AQ5H913 290 aaPredicted RBP16.73■□□□□ 0.27
NXF1-206ENST00000527902 DCAF10Q5QP82 559 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 NUDCD3Q8IVD9 361 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 ZCCHC7Q8N3Z6 543 aaKnown RBP16.73■□□□□ 0.27
NXF1-206ENST00000527902 PLPP5Q8NEB5 264 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 SH3GL2Q99962 352 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 CENPKQ9BS16 269 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 TRMOQ9BU70 441 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 DDX31Q9H8H2 851 aaKnown RBP16.73■□□□□ 0.27
NXF1-206ENST00000527902 LYRM4Q9HD34 91 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 CLDN16Q9Y5I7 305 aa16.73■□□□□ 0.27
NXF1-206ENST00000527902 IGKV3D-11A0A0A0MRZ8 115 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 IGHV3-20A0A0C4DH32 117 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 TMEM233B4DJY2 109 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 PSMD12O00232 456 aaPredicted RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 BIRC5O15392 142 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 CYC1P08574 325 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 MAOAP21397 527 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 JAK1P23458 1154 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 TSFMP43897 325 aaKnown RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 HMGCS1Q01581 520 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 CSTF3Q12996 717 aaKnown RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 SLAMF1Q13291 335 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 MRM1Q6IN84 353 aaKnown RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 QSOX2Q6ZRP7 698 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 ANKRD37Q7Z713 158 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 NUDT13Q86X67 352 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 METTL4Q8N3J2 472 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 TMEM102Q8N9M5 508 aaPredicted RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
NXF1-206ENST00000527902 NECTIN3Q9NQS3 549 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 ZNF446Q9NWS9 450 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 FBXW2Q9UKT8 454 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 PTGDR2Q9Y5Y4 395 aa16.72■□□□□ 0.27
NXF1-206ENST00000527902 UQCRHLA0A096LP55 91 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 IGHV1-45A0A0A0MS14 117 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 H3BQF6 201 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 AZIN1O14977 448 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 PRKRAO75569 313 aaKnown RBP16.71■□□□□ 0.27
NXF1-206ENST00000527902 LYPLA1O75608 230 aaPredicted RBP16.71■□□□□ 0.27
NXF1-206ENST00000527902 UQCRHP07919 91 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 HSD3B1P14060 373 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 HSD3B2P26439 372 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 TPP2P29144 1249 aaPredicted RBP16.71■□□□□ 0.27
NXF1-206ENST00000527902 Q0VFX4 171 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 LY6DQ14210 128 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 CHI3L2Q15782 390 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 KANK2Q63ZY3 851 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 COMMD6Q7Z4G1 85 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 MGARPQ8TDB4 240 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 METTL21AQ8WXB1 218 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 ATP6V1G3Q96LB4 118 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 PTCHD1Q96NR3 888 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 UBL7Q96S82 380 aaPredicted RBP16.71■□□□□ 0.27
NXF1-206ENST00000527902 WDR77Q9BQA1 342 aaPredicted RBP16.71■□□□□ 0.27
NXF1-206ENST00000527902 ZNF160Q9HCG1 818 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 VPS29Q9UBQ0 182 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 FIS1Q9Y3D6 152 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 ATG4BQ9Y4P1 393 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 ASB4Q9Y574 426 aa16.71■□□□□ 0.27
NXF1-206ENST00000527902 SERTM1A2A2V5 107 aa16.7■□□□□ 0.26
NXF1-206ENST00000527902 ITM2AO43736 263 aa16.7■□□□□ 0.26
NXF1-206ENST00000527902 PRMT3O60678 531 aa16.7■□□□□ 0.26
NXF1-206ENST00000527902 CRCPO75575 148 aa16.7■□□□□ 0.26
NXF1-206ENST00000527902 KLK1P06870 262 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms