RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ELAVL1Q15717 326 aaKnown RBP21.87■■□□□ 1.09
CPSF1-202ENST00000527827 KRTAP21-3Q3LHN1 58 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 TMIGD1Q6UXZ0 262 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 RGS9BPQ6ZS82 235 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 TTLQ8NG68 377 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 OR5M9Q8NGP3 310 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 OR5M3Q8NGP4 307 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 SREK1Q8WXA9 508 aaKnown RBP21.87■■□□□ 1.09
CPSF1-202ENST00000527827 CCT6BQ92526 530 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 CFAP36Q96G28 342 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 EGFL8Q99944 293 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 TTTY12Q9BZ98 90 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 LIPGQ9Y5X9 500 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 PSAT1Q9Y617 370 aa21.87■■□□□ 1.09
CPSF1-202ENST00000527827 G3V3Y1 287 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 ACOT7O00154 380 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 CYR61O00622 381 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 B3GALT2O43825 422 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 KLK8O60259 260 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 H2AFYO75367 372 aaKnown RBP21.86■■□□□ 1.09
CPSF1-202ENST00000527827 WDR47O94967 919 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 IVDP26440 423 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 HNMTP50135 292 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 ZNF460Q14592 562 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 ZNF750Q32MQ0 723 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 ADPRMQ3LIE5 342 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 STEAP4Q687X5 459 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 VN1R5Q7Z5H4 357 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 TMEM200AQ86VY9 491 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 TMEM132CQ8N3T6 1108 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 NKAPQ8N5F7 415 aaKnown RBP21.86■■□□□ 1.09
CPSF1-202ENST00000527827 NRGNQ92686 78 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 PWWP2AQ96N64 755 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 CSF3RQ99062 836 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 CHMP2BQ9UQN3 213 aa21.86■■□□□ 1.09
CPSF1-202ENST00000527827 MRPS33Q9Y291 106 aaKnown RBP21.86■■□□□ 1.09
CPSF1-202ENST00000527827 MYOCOSA0A1B0GUC4 107 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 IGHG3P01860 377 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 ACVR2AP27037 513 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 HK2P52789 917 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 PLA2G16P53816 162 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 LIM2P55344 173 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 BMPR2Q13873 1038 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 CES4AQ5XG92 561 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 HSDL2Q6YN16 418 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 SLC22A16Q86VW1 577 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 ZNF321PQ8N8H1 164 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 OR2L5Q8NG80 312 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 PTPMT1Q8WUK0 201 aaPredicted RBP21.85■■□□□ 1.09
CPSF1-202ENST00000527827 ANKRD49Q8WVL7 239 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 RHBDF1Q96CC6 855 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 SMC6Q96SB8 1091 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 OSBPL9Q96SU4 736 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 TTYH2Q9BSA4 534 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 NT5DC2Q9H857 520 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 FAM215AQ9Y5M1 114 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 CLCA3PQ9Y6N3 262 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 AKAP6Q13023 2319 aa21.85■■□□□ 1.09
CPSF1-202ENST00000527827 PRRC2AP48634 2157 aaKnown RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 GOLGA6L10A0A0M3HER8 536 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 OR14I1A6ND48 311 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 ZNF354AO60765 605 aaPredicted RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 DIAPH2O60879 1101 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 CLEC3AO75596 197 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 IFNA16P05015 189 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 CNR1P21554 472 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 CERS1P27544 350 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 DNAJA1P31689 397 aaKnown RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 TAS2R39P59534 338 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 TSNQ15631 228 aaKnown RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 NDUFAF5Q5TEU4 345 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 RTL6Q6ICC9 239 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 ADNP2Q6IQ32 1131 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 ZC3HC1Q86WB0 502 aaKnown RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 TMEM251Q8N6I4 163 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 SCYL1Q96KG9 808 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 SERINC2Q96SA4 455 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 FAM173AQ9BQD7 235 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 REXO4Q9GZR2 422 aaKnown RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 DDX47Q9H0S4 455 aaKnown RBP21.84■■□□□ 1.09
CPSF1-202ENST00000527827 DAPP1Q9UN19 280 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 TEX264Q9Y6I9 313 aa21.84■■□□□ 1.09
CPSF1-202ENST00000527827 A0A088AWK7 358 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 A0A1B0GVC2 190 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 FAM95CA0A1B0GW59 222 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 BCKDKO14874 412 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 PRAMEF4O60810 478 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 CTNSO60931 367 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 GLI4P10075 376 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 ZNF10P21506 573 aaPredicted RBP21.83■■□□□ 1.09
CPSF1-202ENST00000527827 GSTM2P28161 218 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 MAGEA5P43359 124 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 MYBPHQ13203 477 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 PRAMEF9Q5VWM5 478 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 ZNF585AQ6P3V2 769 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 ABHD17CQ6PCB6 329 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 RTL4Q6ZR62 310 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 GK5Q6ZS86 529 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 TRILQ7L0X0 811 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 CLYBLQ8N0X4 340 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms